Detailed information of g1250.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: WP_127766148.1, F0F1 ATP synthase subunit gamma [Hwanghaeella grinnelliae]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
A6UDM2ATP synthase gamma chain OS=Sinorhizobium medicae (strain WSM419) OX=366394 GN=atpG PE=3 SV=1
Q8UC75ATP synthase gamma chain OS=Agrobacterium fabrum (strain C58 / ATCC 33970) OX=176299 GN=atpG PE=3 SV=1
B5ZSN8ATP synthase gamma chain OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) OX=395492 GN=atpG PE=3 SV=1
Gene familySubfamily
Transcription Factors FamilyETS
Transcription Factors FamilyTHAP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00186DHFR_1Dihydrofolate reductaseDomainInterproscan
PF01477PLATPLAT/LH2 domainDomainInterproscan
PF07687M20_dimerPeptidase dimerisation domainDomainInterproscan
PF01546Peptidase_M20Peptidase family M20/M25/M40FamilyInterproscan
PF13857Ank_5Ankyrin repeats (many copies)RepeatInterproscan
PF00023AnkAnkyrin repeatRepeatInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF00178EtsEts-domainDomainInterproscan
PF00231ATP-syntATP synthaseDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF05485THAPTHAP domainDomainInterproscan
PF00413Peptidase_M10MatrixinDomainInterproscan
PF01471PG_binding_1Putative peptidoglycan binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR024072Homologous_superfamilyDihydrofolate reductase-like domain superfamilyInterproscan
IPR001796DomainDihydrofolate reductase domainInterproscan
IPR012259FamilyDihydrofolate reductaseInterproscan
IPR001024DomainPLAT/LH2 domainInterproscan
IPR036392Homologous_superfamilyPLAT/LH2 domain superfamilyInterproscan
IPR052970FamilyInner ear hair cell lipoxygenase homology domain-containing proteinInterproscan
IPR052030FamilyPeptidase M20/M20A family hydrolasesInterproscan
IPR017144FamilyXaa-Arg dipeptidaseInterproscan
IPR017439FamilyAmidohydrolaseInterproscan
IPR036264Homologous_superfamilyBacterial exopeptidase dimerisation domainInterproscan
IPR011650DomainPeptidase M20, dimerisation domainInterproscan
IPR002933FamilyPeptidase M20Interproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR000418DomainEts domainInterproscan
IPR046328FamilyETS familyInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR000131FamilyATP synthase, F1 complex, gamma subunitInterproscan
IPR035968Homologous_superfamilyATP synthase, F1 complex, gamma subunit superfamilyInterproscan
IPR023632Conserved_siteATP synthase, F1 complex, gamma subunit conserved siteInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR006612DomainTHAP-type zinc fingerInterproscan
IPR001818DomainPeptidase M10, metallopeptidaseInterproscan
IPR033739DomainPeptidase M10A, catalytic domainInterproscan
IPR021190FamilyPeptidase M10AInterproscan
IPR006026DomainPeptidase, metallopeptidaseInterproscan
IPR036365Homologous_superfamilyPGBD-like superfamilyInterproscan
IPR002477DomainPeptidoglycan binding-likeInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR021158Binding_sitePeptidase M10A, cysteine switch, zinc binding siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48069DIHYDROFOLATE REDUCTASEInterproscan
PTHR45901PROTEIN CBG12474Interproscan
PTHR30575PEPTIDASE M20Interproscan
PTHR24198ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR11849ETSInterproscan
PTHR11693ATP SYNTHASE GAMMA CHAINInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR10201MATRIX METALLOPROTEINASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004146Molecular Functiondihydrofolate reductase activityInterproscan
GO:0046654Biological Processtetrahydrofolate biosynthetic processInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0046452Biological Processdihydrofolate metabolic processInterproscan
GO:0046655Biological Processfolic acid metabolic processInterproscan
GO:0050661Molecular FunctionNADP bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0016805Molecular Functiondipeptidase activityInterproscan
GO:0016787Molecular Functionhydrolase activityInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0030154Biological Processcell differentiationInterproscan
GO:0015986Biological Processproton motive force-driven ATP synthesisInterproscan
GO:0045261Cellular Componentproton-transporting ATP synthase complex, catalytic core F(1)Interproscan
GO:0046933Molecular Functionproton-transporting ATP synthase activity, rotational mechanismInterproscan
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0030198Biological Processextracellular matrix organizationInterproscan
GO:0030574Biological Processcollagen catabolic processInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K07999MMP20; matrix metalloproteinase-20 (enamelysin)EC:3.4.24.-
Photosynthesis proteinsko00194deepkoala
Peptidases and inhibitorsko01002deepkoala
Antifolate resistanceko01523deepkoala
Peptidases and inhibitorsko01002deepkoala

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