Detailed information of g1252.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: MBT5912318.1, amino acid ABC transporter substrate-binding protein [Rhodospirillaceae bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q52663Glutamate/glutamine/aspartate/asparagine-binding protein BztA OS=Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003) OX=272942 GN=bztA PE=3 SV=2
Q52812General L-amino acid-binding periplasmic protein AapJ OS=Rhizobium johnstonii (strain DSM 114642 / LMG 32736 / 3841) OX=216596 GN=aapJ PE=1 SV=1
P58068Putative amino-acid ABC transporter-binding protein YhdW OS=Escherichia coli O157:H7 OX=83334 GN=yhdW PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00005ABC_tranABC transporterDomainInterproscan
PF00497SBP_bac_3Bacterial extracellular solute-binding proteins, family 3DomainInterproscan
PF10699HAP2-GCS1Male gamete fusion factorDomainInterproscan
PF13848Thioredoxin_6Thioredoxin-like domainDomainInterproscan
PF00085ThioredoxinThioredoxinDomainInterproscan
PF00630FilaminFilamin/ABP280 repeatDomainInterproscan
PF13445zf-RING_UBOXRING-type zinc-fingerDomainInterproscan
PF00643zf-B_boxB-box zinc fingerDomainInterproscan
PF01436NHLNHL repeatRepeatInterproscan
PF05608DUF778Protein of unknown function (DUF778)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051455FamilyBacterial solute-binding protein 3Interproscan
IPR003439DomainABC transporter-like, ATP-binding domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR001638DomainSolute-binding protein family 3/N-terminal domain of MltFInterproscan
IPR040326FamilyHAP2/GCS1Interproscan
IPR018928DomainGenerative cell specific-1/HAP2 domainInterproscan
IPR017937Conserved_siteThioredoxin, conserved siteInterproscan
IPR005792FamilyProtein disulphide isomeraseInterproscan
IPR005788DomainProtein disulfide-isomerase, thioredoxin-like domainInterproscan
IPR036249Homologous_superfamilyThioredoxin-like superfamilyInterproscan
IPR013766DomainThioredoxin domainInterproscan
IPR011042Homologous_superfamilySix-bladed beta-propeller, TolB-likeInterproscan
IPR001258RepeatNHL repeatInterproscan
IPR017868RepeatFilamin/ABP280 repeat-likeInterproscan
IPR047153FamilyTRIM45/56/19Interproscan
IPR027370DomainZinc finger, RING-type, eukaryoticInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR000315DomainB-box-type zinc fingerInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR001298RepeatFilamin/ABP280 repeatInterproscan
IPR003649DomainB-box, C-terminalInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR014756Homologous_superfamilyImmunoglobulin E-setInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR014776Homologous_superfamilyTetrapyrrole methylase, subdomain 2Interproscan
IPR004551FamilyDiphthine synthaseInterproscan
IPR035996Homologous_superfamilyTetrapyrrole methylase superfamilyInterproscan
IPR008496FamilyTMEM222/RTE1Interproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR30085AMINO ACID ABC TRANSPORTER PERMEASEInterproscan
PTHR31764PROTEIN HAPLESS 2Interproscan
PTHR18929PROTEIN DISULFIDE ISOMERASEInterproscan
PTHR25462BONUS, ISOFORM C-RELATEDInterproscan
PTHR22955RETROTRANSPOSONInterproscan
PTHR10882DIPHTHINE SYNTHASEInterproscan
PTHR20921UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0003756Molecular Functionprotein disulfide isomerase activityInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0006457Biological Processprotein foldingInterproscan
GO:0034976Biological Processresponse to endoplasmic reticulum stressInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008168Molecular Functionmethyltransferase activityInterproscan
GO:0004164Molecular Functiondiphthine synthase activityInterproscan
GO:0017183Biological Processprotein histidyl modification to diphthamideInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02986RP-S4, NAM9, rpsD; small subunit ribosomal protein S4-Exosomeko04147deepkoala
MAPK signaling pathway - plantko04016deepkoala
Ribosomeko03011deepkoala

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