Detailed information of g1255.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: WP_155155131.1, 3-deoxy-manno-octulosonate cytidylyltransferase [Curvivirga aplysinae]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
A7HPP13-deoxy-manno-octulosonate cytidylyltransferase OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) OX=402881 GN=kdsB PE=3 SV=1
Q2VZK33-deoxy-manno-octulosonate cytidylyltransferase OS=Paramagnetospirillum magneticum (strain ATCC 700264 / AMB-1) OX=342108 GN=kdsB PE=3 SV=1
Q2RPI73-deoxy-manno-octulosonate cytidylyltransferase OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIMB 8255 / S1) OX=269796 GN=kdsB PE=3 SV=2
Gene familySubfamily
Transcription Factors FamilyHMG
Transcription Factors FamilyHMG

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00505HMG_boxHMG (high mobility group) boxDomainInterproscan
PF03189OtopetrinOtopetrinFamilyInterproscan
PF02348CTP_transf_3CytidylyltransferaseFamilyInterproscan
PF07690MFS_1Major Facilitator SuperfamilyFamilyInterproscan
PF08241Methyltransf_11Methyltransferase domainDomainInterproscan
PF20700MutatorMutator-like transposaseDomainInterproscan
PF00117GATaseGlutamine amidotransferase class-IDomainInterproscan
PF06418CTP_synth_NCTP synthase N-terminusDomainInterproscan
PF00160Pro_isomeraseCyclophilin type peptidyl-prolyl cis-trans isomerase/CLDDomainInterproscan
PF03972MmgE_PrpD_NMmgE/PrpD N-terminal domainDomainInterproscan
PF19305MmgE_PrpD_CMmgE/PrpD C-terminal domainDomainInterproscan
PF08916Phe_ZIPPhenylalanine zipperDomainInterproscan
PF00017SH2SH2 domainDomainInterproscan
PF00169PHPH domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027705FamilyFlotillin familyInterproscan
IPR036259Homologous_superfamilyMFS transporter superfamilyInterproscan
IPR009071DomainHigh mobility group box domainInterproscan
IPR050342FamilyHigh Mobility Group Box (HMGB)Interproscan
IPR036910Homologous_superfamilyHigh mobility group box domain superfamilyInterproscan
IPR004878FamilyOtopetrinInterproscan
IPR003329FamilyAcylneuraminate cytidylyltransferaseInterproscan
IPR029044Homologous_superfamilyNucleotide-diphospho-sugar transferasesInterproscan
IPR020846DomainMajor facilitator superfamily domainInterproscan
IPR050382FamilyMajor Facilitator Superfamily Sodium/Anion CotransporterInterproscan
IPR011701FamilyMajor facilitator superfamilyInterproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR050602FamilyMalonyl-ACP O-MethyltransferaseInterproscan
IPR013216DomainMethyltransferase type 11Interproscan
IPR050140FamilySRY-related HMG-box transcription factorsInterproscan
IPR049012DomainMutator-like transposase domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR036148Homologous_superfamilyMmgE/PrpD superfamilyInterproscan
IPR033828DomainCTP synthase GATase domainInterproscan
IPR017456DomainCTP synthase, N-terminalInterproscan
IPR012705Family2-methylcitrate dehydratase PrpDInterproscan
IPR029000Homologous_superfamilyCyclophilin-like domain superfamilyInterproscan
IPR017926DomainGlutamine amidotransferaseInterproscan
IPR002130DomainCyclophilin-type peptidyl-prolyl cis-trans isomerase domainInterproscan
IPR004468FamilyCTP synthaseInterproscan
IPR045336DomainMmgE/PrpD, N-terminalInterproscan
IPR029062Homologous_superfamilyClass I glutamine amidotransferase-likeInterproscan
IPR045337DomainMmgE/PrpD, C-terminalInterproscan
IPR042188Homologous_superfamilyMmgE/PrpD superfamily, domain 2Interproscan
IPR042183Homologous_superfamilyMmgE/PrpD superfamily, domain 1Interproscan
IPR020892Conserved_siteCyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved siteInterproscan
IPR052579FamilyZinc finger SWIM domain-containing proteinInterproscan
IPR007527DomainZinc finger, SWIM-typeInterproscan
IPR000980DomainSH2 domainInterproscan
IPR030523FamilySH2B adapter proteinInterproscan
IPR001849DomainPleckstrin homology domainInterproscan
IPR015012DomainPhenylalanine zipperInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR036290Homologous_superfamilyPhenylalanine zipper superfamilyInterproscan
IPR036860Homologous_superfamilySH2 domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13806FLOTILLIN-RELATEDInterproscan
PTHR23507ZGC:174356Interproscan
PTHR48112HIGH MOBILITY GROUP PROTEIN DSP1Interproscan
PTHR21522PROTON CHANNEL OTOPInterproscan
PTHR428663-DEOXY-MANNO-OCTULOSONATE CYTIDYLYLTRANSFERASEInterproscan
PTHR11662SOLUTE CARRIER FAMILY 17Interproscan
PTHR13090UNCHARACTERIZEDInterproscan
PTHR10270SOX TRANSCRIPTION FACTORInterproscan
PTHR31751SI:CH211-108C17.2-RELATED-RELATEDInterproscan
PTHR11550CTP SYNTHASEInterproscan
PTHR31569SWIM-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR10872SH2B ADAPTER PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0002090Biological Processregulation of receptor internalizationInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0016600Cellular Componentflotillin complexInterproscan
GO:0031410Cellular Componentcytoplasmic vesicleInterproscan
GO:0045807Biological Processpositive regulation of endocytosisInterproscan
GO:0070528Biological Processprotein kinase C signalingInterproscan
GO:0072659Biological Processprotein localization to plasma membraneInterproscan
GO:1901890Biological Processpositive regulation of cell junction assemblyInterproscan
GO:2000049Biological Processpositive regulation of cell-cell adhesion mediated by cadherinInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0000976Molecular Functiontranscription cis-regulatory region bindingInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0008301Molecular FunctionDNA binding, bendingInterproscan
GO:0015252Molecular Functionproton channel activityInterproscan
GO:1902600Biological Processproton transmembrane transportInterproscan
GO:0016021Cellular ComponentmembraneInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0008690Molecular Function3-deoxy-manno-octulosonate cytidylyltransferase activityInterproscan
GO:0006820Biological Processmonoatomic anion transportInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0032981Biological Processmitochondrial respiratory chain complex I assemblyInterproscan
GO:0008757Molecular FunctionS-adenosylmethionine-dependent methyltransferase activityInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0009653Biological Processanatomical structure morphogenesisInterproscan
GO:0030154Biological Processcell differentiationInterproscan
GO:0016829Molecular Functionlyase activityInterproscan
GO:0003883Molecular FunctionCTP synthase activityInterproscan
GO:0006241Biological ProcessCTP biosynthetic processInterproscan
GO:0006221Biological Processpyrimidine nucleotide biosynthetic processInterproscan
GO:0019679Biological Processpropionate metabolic process, methylcitrate cycleInterproscan
GO:0047547Molecular Function2-methylcitrate dehydratase activityInterproscan
GO:0051537Molecular Function2 iron, 2 sulfur cluster bindingInterproscan
GO:0000413Biological Processprotein peptidyl-prolyl isomerizationInterproscan
GO:0003755Molecular Functionpeptidyl-prolyl cis-trans isomerase activityInterproscan
GO:0019856Biological Processpyrimidine nucleobase biosynthetic processInterproscan
GO:0042802Molecular Functionidentical protein bindingInterproscan
GO:0006457Biological Processprotein foldingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005068Molecular Functiontransmembrane receptor protein tyrosine kinase adaptor activityInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0035556Biological Processintracellular signal transductionInterproscan
GO:0035591Molecular Functionsignaling adaptor activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11830TFAM, MTTFA; transcription factor A, mitochondrial-Transcription factorsko03000deepkoala
Mitochondrial biogenesisko03029deepkoala
Transportersko02000deepkoala
Mitochondrial biogenesisko03029deepkoala

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