Detailed information of g12555.t1 in Montipora capitata

Genomic Location: Sc0000407:99518...101734
NR annotation: XP_029193914.2, 2',3'-cyclic-nucleotide 3'-phosphodiesterase-like isoform X2 [Acropora millepora]
Species abbreviation MCAPI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008016 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05881
all species →		CNPase2',3'-cyclic nucleotide 3'-phosphodiesterase (CNP or CNPase)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008431
all species →		FamilyCyclic nucleotide phosphodiesteraseInterproscan
IPR009097
all species →		Homologous_superfamilyCyclic phosphodiesteraseInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR047325
all species →		DomainCyclic nucleotide phosphodiesterase, catalytic domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10156
all species →		2',3'-CYCLIC-NUCLEOTIDE 3'-PHOSPHODIESTERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004113
all species →		Molecular Function2',3'-cyclic-nucleotide 3'-phosphodiesterase activityInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0009214
all species →		Biological Processcyclic nucleotide catabolic processInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g12555.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP