Detailed information of g1257.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: WP_142848879.1, phenylalanine--tRNA ligase subunit alpha [Telmatospirillum sp. J64-1]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q2RNH8Phenylalanine--tRNA ligase alpha subunit OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIMB 8255 / S1) OX=269796 GN=pheS PE=3 SV=1
B6IPK0Phenylalanine--tRNA ligase alpha subunit OS=Rhodospirillum centenum (strain ATCC 51521 / SW) OX=414684 GN=pheS PE=3 SV=1
B2IGL6Phenylalanine--tRNA ligase alpha subunit OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIMB 8712) OX=395963 GN=pheS PE=3 SV=1
Gene familySubfamily
Transcription Factors Familyzf-BED

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01409tRNA-synt_2dtRNA synthetases class II core domain (F)DomainInterproscan
PF02912Phe_tRNA-synt_NAminoacyl tRNA synthetase class II, N-terminal domainDomainInterproscan
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan
PF00342PGIPhosphoglucose isomeraseDomainInterproscan
PF00501AMP-bindingAMP-binding enzymeFamilyInterproscan
PF02892zf-BEDBED zinc fingerDomainInterproscan
PF01077NIR_SIRNitrite and sulphite reductase 4Fe-4S domainFamilyInterproscan
PF03460NIR_SIR_ferrNitrite/Sulfite reductase ferredoxin-like half domainRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR045864Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR022911FamilyPhenylalanine-tRNA ligase alpha chain 1, bacterialInterproscan
IPR004529FamilyPhenylalanyl-tRNA synthetase, class IIc, alpha subunitInterproscan
IPR002319DomainPhenylalanyl-tRNA synthetaseInterproscan
IPR004188DomainPhenylalanine-tRNA ligase, class II, N-terminalInterproscan
IPR010978Homologous_superfamilyClass I and II aminoacyl-tRNA synthetase, tRNA-binding armInterproscan
IPR006195DomainAminoacyl-tRNA synthetase, class IIInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR050373FamilyFibrinogen C-terminal domain-containing proteinInterproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR042086Homologous_superfamilyMethyltransferase, alpha-helical capping domainInterproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR046348Homologous_superfamilySIS domain superfamilyInterproscan
IPR035482DomainPhosphoglucose isomerase, SIS domain 2Interproscan
IPR018189Conserved_sitePhosphoglucose isomerase, conserved siteInterproscan
IPR035476DomainPhosphoglucose isomerase, SIS domain 1Interproscan
IPR001672FamilyPhosphoglucose isomerase (PGI)Interproscan
IPR023096Homologous_superfamilyPhosphoglucose isomerase, C-terminalInterproscan
IPR039341FamilyCilia- and flagella-associated protein 99Interproscan
IPR003656DomainZinc finger, BED-typeInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR042099Homologous_superfamilyANL, N-terminal domainInterproscan
IPR000873DomainAMP-dependent synthetase/ligase domainInterproscan
IPR006067DomainNitrite/sulphite reductase 4Fe-4S domainInterproscan
IPR045854Homologous_superfamilyNitrite and sulphite reductase 4Fe-4S domain-like superfamilyInterproscan
IPR006066Binding_siteNitrite/sulphite reductase iron-sulphur/sirohaem-binding siteInterproscan
IPR005117DomainNitrite/Sulfite reductase ferredoxin-like domainInterproscan
IPR036136Homologous_superfamilyNitrite/Sulfite reductase ferredoxin-like domain superfamilyInterproscan
IPR045169FamilyNitrite and sulphite reductase 4Fe-4S domain containing proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22955RETROTRANSPOSONInterproscan
PTHR11538PHENYLALANYL-TRNA SYNTHETASEInterproscan
PTHR19143FIBRINOGEN/TENASCIN/ANGIOPOEITINInterproscan
PTHR11469GLUCOSE-6-PHOSPHATE ISOMERASEInterproscan
PTHR34649CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 99Interproscan
PTHR43272LONG-CHAIN-FATTY-ACID--COA LIGASEInterproscan
PTHR11493SULFITE REDUCTASE [NADPH] SUBUNIT BETA-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004826Molecular Functionphenylalanine-tRNA ligase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006432Biological Processphenylalanyl-tRNA aminoacylationInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0000049Molecular FunctiontRNA bindingInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0043039Biological ProcesstRNA aminoacylationInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan
GO:0097367Molecular Functioncarbohydrate derivative bindingInterproscan
GO:1901135Biological Processcarbohydrate derivative metabolic processInterproscan
GO:0004347Molecular Functionglucose-6-phosphate isomerase activityInterproscan
GO:0006094Biological ProcessgluconeogenesisInterproscan
GO:0006096Biological Processglycolytic processInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0048029Molecular Functionmonosaccharide bindingInterproscan
GO:0051156Biological Processglucose 6-phosphate metabolic processInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0004467Molecular Functionlong-chain fatty acid-CoA ligase activityInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0020037Molecular Functionheme bindingInterproscan
GO:0051536Molecular Functioniron-sulfur cluster bindingInterproscan
GO:0000103Biological Processsulfate assimilationInterproscan
GO:0009337Cellular Componentsulfite reductase complex (NADPH)Interproscan
GO:0016002Molecular Functionsulfite reductase activityInterproscan
GO:0050311Molecular Functionsulfite reductase (ferredoxin) activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K00381cysI; sulfite reductase (NADPH) hemoprotein beta-componentEC:1.8.1.2
Transfer RNA biogenesisko03016deepkoala
Exosomeko04147deepkoala
Sulfur metabolismko00920deepkoala

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