Detailed information of g1258.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: WP_155156329.1, phenylalanine--tRNA ligase subunit beta [Curvivirga aplysinae]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q92SS9Phenylalanine--tRNA ligase beta subunit OS=Rhizobium meliloti (strain 1021) OX=266834 GN=pheT PE=3 SV=1
Q2RNH7Phenylalanine--tRNA ligase beta subunit OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIMB 8255 / S1) OX=269796 GN=pheT PE=3 SV=1
Q8UIN4Phenylalanine--tRNA ligase beta subunit OS=Agrobacterium fabrum (strain C58 / ATCC 33970) OX=176299 GN=pheT PE=3 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|SH3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02140Gal_LectinGalactose binding lectin domainDomainInterproscan
PF07653SH3_2Variant SH3 domainDomainInterproscan
PF00625Guanylate_kinGuanylate kinaseDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00561Abhydrolase_1alpha/beta hydrolase foldDomainInterproscan
PF17759tRNA_synthFbetaPhenylalanyl tRNA synthetase beta chain CLM domainDomainInterproscan
PF03147FDX-ACBFerredoxin-fold anticodon binding domainDomainInterproscan
PF03483B3_4B3/4 domainDomainInterproscan
PF01588tRNA_bindPutative tRNA binding domainDomainInterproscan
PF03484B5tRNA synthetase B5 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000922DomainD-galactoside/L-rhamnose binding SUEL lectin domainInterproscan
IPR043159Homologous_superfamilyD-galactoside/L-rhamnose binding SUEL lectin domain superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR001452DomainSH3 domainInterproscan
IPR036028Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR008145DomainGuanylate kinase/L-type calcium channel beta subunitInterproscan
IPR053004FamilyMAGUK Family Regulators of Signaling PathwaysInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR000073DomainAlpha/beta hydrolase fold-1Interproscan
IPR026151FamilyMaspardinInterproscan
IPR029058Homologous_superfamilyAlpha/Beta hydrolase foldInterproscan
IPR005147DomaintRNA synthetase, B5-domainInterproscan
IPR041616DomainPhenylalanyl tRNA synthetase beta chain, core domainInterproscan
IPR002547DomaintRNA-binding domainInterproscan
IPR036690Homologous_superfamilyFerrodoxin-fold anticodon-binding domain superfamilyInterproscan
IPR005121DomainFerrodoxin-fold anticodon-binding domainInterproscan
IPR009061Homologous_superfamilyPutative DNA-binding domain superfamilyInterproscan
IPR004532FamilyPhenylalanine-tRNA ligase, class IIc, beta subunit, bacterial typeInterproscan
IPR005146DomainB3/B4 tRNA-binding domainInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR045060FamilyPhenylalanine-tRNA ligase, class IIc, beta subunitInterproscan
IPR045864Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR020825Homologous_superfamilyPhenylalanyl-tRNA synthetase-like, B3/B4Interproscan
IPR033714DomainPhenylalanly tRNA synthetase, tRNA-binding-domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46780PROTEIN EVA-1Interproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR46360DISKS LARGE HOMOLOG 5Interproscan
PTHR15913ACID CLUSTER PROTEIN 33Interproscan
PTHR10947PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN AND LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0030246Molecular Functioncarbohydrate bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0035331Biological Processnegative regulation of hippo signalingInterproscan
GO:0000287Molecular Functionmagnesium ion bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006432Biological Processphenylalanyl-tRNA aminoacylationInterproscan
GO:0000049Molecular FunctiontRNA bindingInterproscan
GO:0004826Molecular Functionphenylalanine-tRNA ligase activityInterproscan
GO:0009328Cellular Componentphenylalanine-tRNA ligase complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K19367SPG21; maspardin-Transfer RNA biogenesisko03016deepkoala
Endocytosisko04144deepkoala

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