Detailed information of g126.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_052722444.1, transforming growth factor-beta-induced protein ig-h3-like [Crassostrea angulata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P55906Transforming growth factor-beta-induced protein ig-h3 OS=Bos taurus OX=9913 GN=TGFBI PE=1 SV=2
P82198Transforming growth factor-beta-induced protein ig-h3 OS=Mus musculus OX=10090 GN=Tgfbi PE=1 SV=1
O11780Transforming growth factor-beta-induced protein ig-h3 OS=Sus scrofa OX=9823 GN=TGFBI PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02992Transposase_21Transposase family tnp2FamilyInterproscan
PF00730HhH-GPDHhH-GPD superfamily base excision DNA repair proteinDomainInterproscan
PF00633HHHHelix-hairpin-helix motifMotifInterproscan
PF18701DUF5641Family of unknown function (DUF5641)DomainInterproscan
PF12947EGF_3EGF domainDomainInterproscan
PF13385Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan
PF000027tm_27 transmembrane receptor (Secretin family)FamilyInterproscan
PF01825GPSGPCR proteolysis site, GPS, motif MotifInterproscan
PF16489GAINGPCR-Autoproteolysis INducing (GAIN) domainDomainInterproscan
PF00041fn3Fibronectin type III domainDomainInterproscan
PF09754PAC2PAC2 familyFamilyInterproscan
PF01400AstacinAstacin (Peptidase family M12A)DomainInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF02469FasciclinFasciclin domainDomainInterproscan
PF02198SAM_PNTSterile alpha motif (SAM)/Pointed domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004242FamilyTransposon, En/Spm-likeInterproscan
IPR003265DomainHhH-GPD domainInterproscan
IPR004036Conserved_siteEndonuclease III-like, conserved site-2Interproscan
IPR023170Homologous_superfamilyHelix-hairpin-helix, base-excision DNA repair, C-terminalInterproscan
IPR030841FamilyEndonuclease III-like protein 1Interproscan
IPR000445Conserved_siteHelix-hairpin-helix motifInterproscan
IPR011257Homologous_superfamilyDNA glycosylaseInterproscan
IPR040676DomainDomain of unknown function DUF5641Interproscan
IPR003961DomainFibronectin type IIIInterproscan
IPR000203Conserved_siteGPS motifInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR024731DomainEGF domainInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR017983Conserved_siteGPCR, family 2, secretin-like, conserved siteInterproscan
IPR000832FamilyGPCR, family 2, secretin-likeInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR036445Homologous_superfamilyGPCR family 2, extracellular hormone receptor domain superfamilyInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR001879DomainGPCR, family 2, extracellular hormone receptor domainInterproscan
IPR046338Homologous_superfamilyGAIN domain superfamilyInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR017981DomainGPCR, family 2-like, 7TMInterproscan
IPR032471DomainGAIN domain, N-terminalInterproscan
IPR016562FamilyProteasome assembly chaperone 2, eukaryoticInterproscan
IPR019151FamilyProteasome assembly chaperone 2Interproscan
IPR038389Homologous_superfamilyProteasome assembly chaperone 2 superfamilyInterproscan
IPR034035DomainAstacin-like metallopeptidase domainInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR001506DomainPeptidase M12AInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR006026DomainPeptidase, metallopeptidaseInterproscan
IPR003582DomainShKT domainInterproscan
IPR036378Homologous_superfamilyFAS1 domain superfamilyInterproscan
IPR000782DomainFAS1 domainInterproscan
IPR050904FamilyCell adhesion and biosynthesis-related proteinInterproscan
IPR003118DomainPointed domainInterproscan
IPR013761Homologous_superfamilySterile alpha motif/pointed domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10775UNCHARACTERIZEDInterproscan
PTHR43286ENDONUCLEASE III-LIKE PROTEIN 1Interproscan
PTHR22955RETROTRANSPOSONInterproscan
PTHR12011ADHESION G-PROTEIN COUPLED RECEPTORInterproscan
PTHR12970PROTEASOME ASSEMBLY CHAPERONE 2Interproscan
PTHR10127DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAININGInterproscan
PTHR34239APPLE DOMAIN-CONTAINING PROTEINInterproscan
PTHR10900PERIOSTIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006284Biological Processbase-excision repairInterproscan
GO:0003906Molecular FunctionDNA-(apurinic or apyrimidinic site) endonuclease activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006285Biological Processbase-excision repair, AP site formationInterproscan
GO:0019104Molecular FunctionDNA N-glycosylase activityInterproscan
GO:0000703Molecular Functionoxidized pyrimidine nucleobase lesion DNA N-glycosylase activityInterproscan
GO:0006296Biological Processobsolete nucleotide-excision repair, DNA incision, 5'-to lesionInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007189Biological Processadenylate cyclase-activating G protein-coupled receptor signaling pathwayInterproscan
GO:0004888Molecular Functiontransmembrane signaling receptor activityInterproscan
GO:0007166Biological Processcell surface receptor signaling pathwayInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0043248Biological Processproteasome assemblyInterproscan
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0030198Biological Processextracellular matrix organizationInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan
GO:0050839Molecular Functioncell adhesion molecule bindingInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10773NTHL1, nth; endonuclease IIIEC:3.2.2.-
EC:4.2.99.18
MAPK signaling pathway - flyko04013deepkoala
G protein-coupled receptorsko04030deepkoala
Proteasomeko03051deepkoala
DNA repair and recombination proteinsko03400deepkoala

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