Detailed information of g12601.t1 in Acropora digitifera

Genomic Location: chr6Alt:2598799...2607701
NR annotation: XP_044182517.1, LOW QUALITY PROTEIN: DDB1- and CUL4-associated factor 1-like [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q80TR8DDB1- and CUL4-associated factor 1 OS=Mus musculus OX=10090 GN=Dcaf1 PE=1 SV=4
Q9Y4B6DDB1- and CUL4-associated factor 1 OS=Homo sapiens OX=9606 GN=DCAF1 PE=1 SV=3
Q9W2F2Protein mahjong OS=Drosophila melanogaster OX=7227 GN=mahj PE=1 SV=2
 Gene family
Family typeMembership / link
Ubiquitin familyUBD|Other|Beta-prp · all ubiquitin genes in this species

 Pfam domain
No Pfam domain signature was detected for g12601.t1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR006594
all species →		Conserved_siteLIS1 homology motifInterproscan
IPR036322
all species →		Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR015943
all species →		Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR033270
all species →		FamilyVPRBP/DCAF1 familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13129
all species →		VPRBP PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0016567
all species →		Biological Processprotein ubiquitinationInterproscan
GO:0080008
all species →		Cellular ComponentCul4-RING E3 ubiquitin ligase complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g12601.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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