Detailed information of g12621.t1 in Montipora capitata

Genomic Location: Sc0000411:169938...172877
NR annotation: XP_015756562.1, PREDICTED: DNA oxidative demethylase ALKBH1-like [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P0CB42Nucleic acid dioxygenase ALKBH1 OS=Mus musculus OX=10090 GN=Alkbh1 PE=1 SV=1
Q13686Nucleic acid dioxygenase ALKBH1 OS=Homo sapiens OX=9606 GN=ALKBH1 PE=1 SV=2
Q54N08Alpha-ketoglutarate-dependent dioxygenase alkB OS=Dictyostelium discoideum OX=44689 GN=alkB PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF135322OG-FeII_Oxy_22OG-Fe(II) oxygenase superfamilyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004574FamilyAlkylated DNA repair protein AlkBInterproscan
IPR005123DomainOxoglutarate/iron-dependent dioxygenaseInterproscan
IPR027450DomainAlpha-ketoglutarate-dependent dioxygenase AlkB-likeInterproscan
IPR037151Homologous_superfamilyAlpha-ketoglutarate-dependent dioxygenase AlkB-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16557ALKYLATED DNA REPAIR PROTEIN ALKB-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0008198Molecular Functionferrous iron bindingInterproscan
GO:0035513Biological Processoxidative RNA demethylationInterproscan
GO:0035515Molecular Functionoxidative RNA demethylase activityInterproscan
GO:0035516Molecular Functionbroad specificity oxidative DNA demethylase activityInterproscan
GO:0035552Biological Processobsolete oxidative single-stranded DNA demethylationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10765ALKBH1; alkylated DNA repair protein alkB homolog 1EC:1.14.11.51
EC:4.2.99.18
EC:1.14.11.-
Enzymes with EC numbers-deepkoala

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