Detailed information of g1264.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: MBE7021154.1, UDP-glucose 4-epimerase GalE [Oscillospiraceae bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P55180UDP-glucose 4-epimerase OS=Bacillus subtilis (strain 168) OX=224308 GN=galE PE=1 SV=1
Q8R059UDP-glucose 4-epimerase OS=Mus musculus OX=10090 GN=Gale PE=1 SV=1
Q9SN58UDP-glucose 4-epimerase 5 OS=Arabidopsis thaliana OX=3702 GN=UGE5 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00685Sulfotransfer_1Sulfotransferase domainDomainInterproscan
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan
PF00013KH_1KH domainDomainInterproscan
PF00536SAM_1SAM domain (Sterile alpha motif)DomainInterproscan
PF07741BRF1Brf1-like TBP-binding domainDomainInterproscan
PF08271TF_Zn_RibbonTFIIB zinc-bindingDomainInterproscan
PF12739TRAPPC-Trs85ER-Golgi trafficking TRAPP I complex 85 kDa subunitFamilyInterproscan
PF00459Inositol_PInositol monophosphatase familyFamilyInterproscan
PF01370EpimeraseNAD dependent epimerase/dehydratase familyFamilyInterproscan
PF03630FumbleFumble FamilyInterproscan
PF01937ARMT1-like_domDamage-control phosphatase ARMT1-like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000863DomainSulfotransferase domainInterproscan
IPR037359FamilyHeparan sulfate sulfotransferaseInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR050373FamilyFibrinogen C-terminal domain-containing proteinInterproscan
IPR020837Conserved_siteFibrinogen, conserved siteInterproscan
IPR001660DomainSterile alpha motif domainInterproscan
IPR013761Homologous_superfamilySterile alpha motif/pointed domain superfamilyInterproscan
IPR047553DomainBICC1, third type I KH domainInterproscan
IPR004088DomainK Homology domain, type 1Interproscan
IPR036612Homologous_superfamilyK Homology domain, type 1 superfamilyInterproscan
IPR004087DomainK Homology domainInterproscan
IPR013137DomainZinc finger, TFIIB-typeInterproscan
IPR011665DomainBrf1, TBP-binding domainInterproscan
IPR000812FamilyTranscription factor TFIIBInterproscan
IPR024420FamilyTRAPP III complex, Trs85Interproscan
IPR005886FamilyUDP-glucose 4-epimeraseInterproscan
IPR000760FamilyInositol monophosphatase-likeInterproscan
IPR020583Binding_siteInositol monophosphatase, metal-binding siteInterproscan
IPR036291Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR001509DomainNAD-dependent epimerase/dehydrataseInterproscan
IPR004567FamilyType II pantothenate kinaseInterproscan
IPR035073Homologous_superfamilyAt2g17340, three-helix bundle domainInterproscan
IPR043129Homologous_superfamilyATPase, nucleotide binding domainInterproscan
IPR002791DomainDamage-control phosphatase ARMT1-like, metal-binding domainInterproscan
IPR036075Homologous_superfamilyDamage-control phosphatase ARMT1-like, metal-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10605HEPARAN SULFATE SULFOTRANSFERASEInterproscan
PTHR19143FIBRINOGEN/TENASCIN/ANGIOPOEITINInterproscan
PTHR10627SCP160Interproscan
PTHR11618TRANSCRIPTION INITIATION FACTOR IIB-RELATEDInterproscan
PTHR12975TRANSPORT PROTEIN TRAPPInterproscan
PTHR43725UDP-GLUCOSE 4-EPIMERASEInterproscan
PTHR12280PANTOTHENATE KINASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008146Molecular Functionsulfotransferase activityInterproscan
GO:0005794Cellular ComponentGolgi apparatusInterproscan
GO:0015014Biological Processheparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic processInterproscan
GO:0015016Molecular Function[heparan sulfate]-glucosamine N-sulfotransferase activityInterproscan
GO:0019213Molecular Functiondeacetylase activityInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0000126Cellular Componenttranscription factor TFIIIB complexInterproscan
GO:0000995Molecular FunctionRNA polymerase III general transcription initiation factor activityInterproscan
GO:0001006Molecular FunctionRNA polymerase III type 3 promoter sequence-specific DNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006352Biological ProcessDNA-templated transcription initiationInterproscan
GO:0006383Biological Processtranscription by RNA polymerase IIIInterproscan
GO:0070897Biological Processtranscription preinitiation complex assemblyInterproscan
GO:0097550Cellular Componenttranscription preinitiation complexInterproscan
GO:1990072Cellular ComponentTRAPPIII protein complexInterproscan
GO:0003978Molecular FunctionUDP-glucose 4-epimerase activityInterproscan
GO:0006012Biological Processgalactose metabolic processInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0033499Biological Processgalactose catabolic process via UDP-galactoseInterproscan
GO:0004594Molecular Functionpantothenate kinase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0015937Biological Processcoenzyme A biosynthetic processInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K20305TRAPPC8, TRS85; trafficking protein particle complex subunit 8-Messenger RNA biogenesisko03019deepkoala
Membrane traffickingko04131deepkoala

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