Detailed information of g12653.t1 in Montipora capitata

Genomic Location: Sc0000412:234338...273063
NR annotation: XP_029209547.2, bactericidal permeability-increasing protein-like [Acropora millepora]
Species Montipora capitata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A0A481NSZ4Bactericidal permeability-increasing protein OS=Sebastes schlegelii OX=214486 GN=BPI PE=1 SV=1
P17213Bactericidal permeability-increasing protein OS=Homo sapiens OX=9606 GN=BPI PE=1 SV=4
P18428Lipopolysaccharide-binding protein OS=Homo sapiens OX=9606 GN=LBP PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001735 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02886
all species →		LBP_BPI_CETP_CLBP / BPI / CETP family, C-terminal domainDomainInterproscan
PF01273
all species →		LBP_BPI_CETPLBP / BPI / CETP family, N-terminal domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR030675
all species →		FamilyLipid binding protein BPI/LBPInterproscan
IPR017942
all species →		DomainLipid-binding serum glycoprotein, N-terminalInterproscan
IPR001124
all species →		DomainLipid-binding serum glycoprotein, C-terminalInterproscan
IPR017943
all species →		Homologous_superfamilyBactericidal permeability-increasing protein, alpha/beta domain superfamilyInterproscan
IPR032942
all species →		FamilyBPI/LBP/Plunc familyInterproscan
IPR017954
all species →		Conserved_siteLipid-binding serum glycoprotein, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10504
all species →		BACTERICIDAL PERMEABILITY-INCREASING BPI PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005615
all species →		Cellular Componentextracellular spaceInterproscan
GO:0008289
all species →		Molecular Functionlipid bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g12653.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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