Detailed information of g1272.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: KAI2648195.1, putative RNA-directed DNA polymerase from transposon BS [Labeo rohita]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8JZR0Long-chain-fatty-acid--CoA ligase 5 OS=Mus musculus OX=10090 GN=Acsl5 PE=1 SV=1
O88813Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1
Q9UKU0Long-chain-fatty-acid--CoA ligase 6 OS=Homo sapiens OX=9606 GN=ACSL6 PE=1 SV=4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16868NMT1_3NMT1-like familyFamilyInterproscan
PF05699Dimer_Tnp_hAThAT family C-terminal dimerisation regionDomainInterproscan
PF15511CENP-T_CCentromere kinetochore component CENP-T histone foldDomainInterproscan
PF01529DHHCDHHC palmitoyltransferaseFamilyInterproscan
PF00498FHAFHA domainFamilyInterproscan
PF01585G-patchG-patch domainFamilyInterproscan
PF17780OCREOCRE domainDomainInterproscan
PF00501AMP-bindingAMP-binding enzymeFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011852FamilyTRAP transporter solute receptor, TAXI familyInterproscan
IPR008906DomainHAT, C-terminal dimerisation domainInterproscan
IPR052035FamilyZinc finger BED domain-containingInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR001951FamilyHistone H4Interproscan
IPR009072Homologous_superfamilyHistone-foldInterproscan
IPR004823DomainTATA box binding protein associated factor (TAF), histone-like fold domainInterproscan
IPR035425DomainCENP-T/Histone H4, histone foldInterproscan
IPR019809Conserved_siteHistone H4, conserved siteInterproscan
IPR001594DomainPalmitoyltransferase, DHHC domainInterproscan
IPR038980FamilySerine/threonine-protein kinase ATM, plantInterproscan
IPR000253DomainForkhead-associated (FHA) domainInterproscan
IPR000467DomainG-patch domainInterproscan
IPR008984Homologous_superfamilySMAD/FHA domain superfamilyInterproscan
IPR035624DomainAGGF1, OCRE domainInterproscan
IPR053027FamilyAngiogenic factor with G patch and FHA domains 1Interproscan
IPR041591DomainOCRE domainInterproscan
IPR042099Homologous_superfamilyANL, N-terminal domainInterproscan
IPR000873DomainAMP-dependent synthetase/ligase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42941SLL1037 PROTEINInterproscan
PTHR46481ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4Interproscan
PTHR10484HISTONE H4Interproscan
PTHR12246PALMITOYLTRANSFERASE ZDHHC16Interproscan
PTHR37079SERINE/THREONINE-PROTEIN KINASE ATMInterproscan
PTHR23106ANGIOGENIC FACTOR WITH G PATCH AND FHA DOMAINS 1Interproscan
PTHR43272LONG-CHAIN-FATTY-ACID--COA LIGASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006334Biological Processnucleosome assemblyInterproscan
GO:0030527Molecular Functionstructural constituent of chromatinInterproscan
GO:0046982Molecular Functionprotein heterodimerization activityInterproscan
GO:0000786Cellular ComponentnucleosomeInterproscan
GO:0016409Molecular Functionpalmitoyltransferase activityInterproscan
GO:0005794Cellular ComponentGolgi apparatusInterproscan
GO:0018345Biological Processprotein palmitoylationInterproscan
GO:0004674Molecular Functionprotein serine/threonine kinase activityInterproscan
GO:0006974Biological ProcessDNA damage responseInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0001676Biological Processlong-chain fatty acid metabolic processInterproscan
GO:0004467Molecular Functionlong-chain fatty acid-CoA ligase activityInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11254H4; histone H4-Oxidative phosphorylationko00190deepkoala
Chromosome and associated proteinsko03036deepkoala

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