Detailed information of g12834.t1.1 in Haliclystus octoradiatus

Genomic Location: not available for this species
NR annotation: XP_044181938.1, tRNA-splicing endonuclease subunit Sen2-like isoform X2 [Acropora millepora]
Species abbreviation HOCTO · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5ZIN2tRNA-splicing endonuclease subunit Sen2 OS=Gallus gallus OX=9031 GN=TSEN2 PE=2 SV=1
Q6P7W5tRNA-splicing endonuclease subunit Sen2 OS=Mus musculus OX=10090 GN=Tsen2 PE=1 SV=1
Q5M954tRNA-splicing endonuclease subunit Sen2 OS=Rattus norvegicus OX=10116 GN=Tsen2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005801 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01974
all species →		tRNA_int_endotRNA intron endonuclease, catalytic C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011856
all species →		Homologous_superfamilytRNA endonuclease-like domain superfamilyInterproscan
IPR006677
all species →		DomaintRNA intron endonuclease, catalytic domain-likeInterproscan
IPR036167
all species →		Homologous_superfamilytRNA intron endonuclease, catalytic domain-like superfamilyInterproscan
IPR006676
all species →		FamilytRNA-splicing endonucleaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21227
all species →		TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan
GO:0000213
all species →		Molecular FunctiontRNA-intron endonuclease activityInterproscan
GO:0006388
all species →		Biological ProcesstRNA splicing, via endonucleolytic cleavage and ligationInterproscan
GO:0000214
all species →		Cellular ComponenttRNA-intron endonuclease complexInterproscan
GO:0000379
all species →		Biological ProcesstRNA-type intron splice site recognition and cleavageInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g12834.t1.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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