Detailed information of g1286.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: MBY0580599.1, hypothetical protein [Rickettsiales bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A0JN61DNA-directed RNA polymerase III subunit RPC9 OS=Bos taurus OX=9913 GN=CRCP PE=2 SV=1
O75575DNA-directed RNA polymerase III subunit RPC9 OS=Homo sapiens OX=9606 GN=CRCP PE=1 SV=1
O35427DNA-directed RNA polymerase III subunit RPC9 OS=Mus musculus OX=10090 GN=Crcp PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00017SH2SH2 domainDomainInterproscan
PF000017tm_17 transmembrane receptor (rhodopsin family)FamilyInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF17771ADAMTS_CR_2ADAMTS cysteine-rich domain 2DomainInterproscan
PF00629MAMMAM domain, meprin/A5/muDomainInterproscan
PF03874RNA_pol_Rpb4RNA polymerase Rpb4FamilyInterproscan
PF00531DeathDeath domainDomainInterproscan
PF18701DUF5641Family of unknown function (DUF5641)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000980DomainSH2 domainInterproscan
IPR036860Homologous_superfamilySH2 domain superfamilyInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR000276FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan
IPR051560FamilyMAM domain-containing proteinInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR000998DomainMAM domainInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR041645DomainADAMTS, cysteine-rich domain 2Interproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR038846FamilyDNA-directed RNA polymerase III subunit RPC9Interproscan
IPR038324Homologous_superfamilyRpb4/RPC9 superfamilyInterproscan
IPR006590DomainRNA polymerase Rpb4/RPC9, coreInterproscan
IPR005574FamilyRNA polymerase subunit Rpb4/RPC9Interproscan
IPR010997Homologous_superfamilyHRDC-like superfamilyInterproscan
IPR052035FamilyZinc finger BED domain-containingInterproscan
IPR011029Homologous_superfamilyDeath-like domain superfamilyInterproscan
IPR000488DomainDeath domainInterproscan
IPR040676DomainDomain of unknown function DUF5641Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR10155PHOSPHATIDYLINOSITOL 3-KINASE REGULATORY SUBUNITInterproscan
PTHR47510REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR242475-HYDROXYTRYPTAMINE RECEPTORInterproscan
PTHR23282APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.Interproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR46704CXC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR15561CALCITONIN GENE-RELATED PEPTIDE-RECEPTOR COMPONENT PROTEINInterproscan
PTHR46481ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4Interproscan
PTHR22955RETROTRANSPOSONInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005942Cellular Componentphosphatidylinositol 3-kinase complexInterproscan
GO:0046854Biological Processphosphatidylinositol phosphate biosynthetic processInterproscan
GO:0046935Molecular Function1-phosphatidylinositol-3-kinase regulator activityInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0004993Molecular FunctionG protein-coupled serotonin receptor activityInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007187Biological ProcessG protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messengerInterproscan
GO:0007268Biological Processchemical synaptic transmissionInterproscan
GO:0030425Cellular ComponentdendriteInterproscan
GO:0030594Molecular Functionneurotransmitter receptor activityInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005666Cellular ComponentRNA polymerase III complexInterproscan
GO:0006384Biological Processtranscription initiation at RNA polymerase III promoterInterproscan
GO:0006352Biological ProcessDNA-templated transcription initiationInterproscan
GO:0030880Cellular ComponentRNA polymerase complexInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0044237Biological Processobsolete cellular metabolic processInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0007165Biological Processsignal transductionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K25304RPC9, CRCP; DNA-directed RNA polymerase III subunit RPC9-Transcription machineryko03021deepkoala

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