Detailed information of g1290.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_002154838.2, YLP motif-containing protein 1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P0CB49YLP motif-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ylpm1 PE=1 SV=1
Q9R0I7YLP motif-containing protein 1 OS=Mus musculus OX=10090 GN=Ylpm1 PE=2 SV=2
P49750YLP motif-containing protein 1 OS=Homo sapiens OX=9606 GN=YLPM1 PE=1 SV=4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF11712Vma12Endoplasmic reticulum-based factor for assembly of V-ATPaseFamilyInterproscan
PF00303Thymidylat_syntThymidylate synthaseDomainInterproscan
PF04811Sec23_trunkSec23/Sec24 trunk domainDomainInterproscan
PF00089TrypsinTrypsinDomainInterproscan
PF15410PH_9Pleckstrin homology domainDomainInterproscan
PF01369Sec7Sec7 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR026314FamilyYLP motif-containing protein 1Interproscan
IPR021013FamilyATPase, vacuolar ER assembly factor, Vma12Interproscan
IPR000398FamilyThymidylate synthaseInterproscan
IPR036926Homologous_superfamilyThymidylate synthase/dCMP hydroxymethylase superfamilyInterproscan
IPR023451DomainThymidylate synthase/dCMP hydroxymethylase domainInterproscan
IPR045097FamilyThymidylate synthase/dCMP hydroxymethylaseInterproscan
IPR020940Active_siteThymidylate synthase, active siteInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR006896DomainSec23/Sec24, trunk domainInterproscan
IPR037364FamilyProtein transport protein Sec23Interproscan
IPR043504Homologous_superfamilyPeptidase S1, PA clan, chymotrypsin-like foldInterproscan
IPR001254DomainSerine proteases, trypsin domainInterproscan
IPR009003Homologous_superfamilyPeptidase S1, PA clanInterproscan
IPR023394Homologous_superfamilySec7, C-terminal domain superfamilyInterproscan
IPR000904DomainSec7 domainInterproscan
IPR035999Homologous_superfamilySec7 domain superfamilyInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR001849DomainPleckstrin homology domainInterproscan
IPR041681DomainPleckstrin homology domain 9Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR13413YLP MOTIF CONTAINING PROTEIN NUCLEAR PROTEIN ZAPInterproscan
PTHR31394TRANSMEMBRANE PROTEIN 199Interproscan
PTHR11548THYMIDYLATE SYNTHASE 1Interproscan
PTHR11141PROTEIN TRANSPORT PROTEIN SEC23Interproscan
PTHR24253TRANSMEMBRANE PROTEASE SERINEInterproscan
PTHR10663GUANYL-NUCLEOTIDE EXCHANGE FACTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0032204Biological Processregulation of telomere maintenanceInterproscan
GO:0012505Cellular Componentendomembrane systemInterproscan
GO:0070072Biological Processvacuolar proton-transporting V-type ATPase complex assemblyInterproscan
GO:0004799Molecular Functionthymidylate synthase activityInterproscan
GO:0006231Biological ProcessdTMP biosynthetic processInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0016741Molecular Functiontransferase activity, transferring one-carbon groupsInterproscan
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0006888Biological Processendoplasmic reticulum to Golgi vesicle-mediated transportInterproscan
GO:0030127Cellular ComponentCOPII vesicle coatInterproscan
GO:0005096Molecular FunctionGTPase activator activityInterproscan
GO:0070971Cellular Componentendoplasmic reticulum exit siteInterproscan
GO:0090110Biological ProcessCOPII-coated vesicle cargo loadingInterproscan
GO:0004252Molecular Functionserine-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0005085Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0032012Biological Processregulation of ARF protein signal transductionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K00560thyA, TYMS; thymidylate synthaseEC:2.1.1.45
Membrane traffickingko04131deepkoala
Membrane traffickingko04131deepkoala
Antifolate resistanceko01523deepkoala

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