Gene detail

Detailed information of g12902.t1.1 in Nemopilema nomurai

Genomic Location: :...
NR annotation: XP_002163195.1, 3'-5' ssDNA/RNA exonuclease TatD [Hydra vulgaris]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
B7LTZ5	3'-5' ssDNA/RNA exonuclease TatD OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73) OX=585054 GN=tatD PE=3 SV=1
Q0SZ31	3'-5' ssDNA/RNA exonuclease TatD OS=Shigella flexneri serotype 5b (strain 8401) OX=373384 GN=tatD PE=3 SV=1
Q9L6M2	3'-5' ssDNA/RNA exonuclease TatD OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=tatD PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01026	TatD_DNase	TatD related DNase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR001130	Family	3'-5' ssDNA/RNA exonuclease TatD-like	Interproscan
IPR000504	Domain	RNA recognition motif domain	Interproscan
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR050891	Family	TatD-type Metallo-dependent Hydrolase	Interproscan
IPR018228	Conserved_site	Deoxyribonuclease, TatD-related, conserved site	Interproscan
IPR032466	Homologous_superfamily	Metal-dependent hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10060	TATD FAMILY DEOXYRIBONUCLEASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016788	Molecular Function	hydrolase activity, acting on ester bonds	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0008310	Molecular Function	single-stranded DNA 3'-5' DNA exonuclease activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K03424	tatD; TatD DNase family protein	EC:3.1.21.-	Enzymes with EC numbers	-	deepkoala