Detailed information of g1294.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_047144502.1, uncharacterized protein LOC100209737 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q15485Ficolin-2 OS=Homo sapiens OX=9606 GN=FCN2 PE=1 SV=2
O70165Ficolin-1 OS=Mus musculus OX=10090 GN=Fcn1 PE=1 SV=1
O70497Ficolin-2 OS=Mus musculus OX=10090 GN=Fcn2 PE=2 SV=2
Gene familySubfamily
Ubiquitin FamilyE2|UBC|UBC
Ubiquitin FamilyUBD|UBC-like|UBC

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00024PAN_1PAN domainDomainInterproscan
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan
PF19028TSP1_spondinSpondin-like TSP1 domainDomainInterproscan
PF03880DbpADbpA RNA binding domain DomainInterproscan
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF01392FzFz domainDomainInterproscan
PF14670FXa_inhibitionCoagulation Factor Xa inhibitory siteDomainInterproscan
PF12661hEGFHuman growth factor-like EGFDomainInterproscan
PF00683TBTB domainFamilyInterproscan
PF12662cEGFComplement Clr-like EGF-likeDomainInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF12947EGF_3EGF domainDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF03670UPF0184Uncharacterised protein family (UPF0184)Coiled-coilInterproscan
PF00179UQ_conUbiquitin-conjugating enzymeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036514Homologous_superfamilySGNH hydrolase superfamilyInterproscan
IPR003609DomainPAN/Apple domainInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR000177DomainApple domainInterproscan
IPR050373FamilyFibrinogen C-terminal domain-containing proteinInterproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR001212DomainSomatomedin B domainInterproscan
IPR044004DomainSpondin-like TSP1 domainInterproscan
IPR039942FamilySomatomedin-B and thrombospondin type-1 domain-containing proteinInterproscan
IPR000629Conserved_siteATP-dependent RNA helicase DEAD-box, conserved siteInterproscan
IPR005580DomainDEAD box helicase DbpA/CsdA, RNA-binding domainInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR014014DomainRNA helicase, DEAD-box type, Q motifInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR050547FamilyDEAD box ATP-dependent RNA helicasesInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR036790Homologous_superfamilyFrizzled cysteine-rich domain superfamilyInterproscan
IPR020067DomainFrizzled domainInterproscan
IPR043159Homologous_superfamilyD-galactoside/L-rhamnose binding SUEL lectin domain superfamilyInterproscan
IPR015526FamilyFrizzled/secreted frizzled-related proteinInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR017878DomainTB domainInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR036773Homologous_superfamilyTGF-beta binding (TB) domain superfamilyInterproscan
IPR013032Conserved_siteEGF-like, conserved siteInterproscan
IPR026823DomainComplement Clr-like EGF domainInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR024731DomainEGF domainInterproscan
IPR051145FamilyGrowth Arrest-Specific/Sex Hormone-Binding/Vitamin K-DependentInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR000608DomainUbiquitin-conjugating enzyme E2Interproscan
IPR016135Homologous_superfamilyUbiquitin-conjugating enzyme/RWD-likeInterproscan
IPR023313Active_siteUbiquitin-conjugating enzyme, active siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19143FIBRINOGEN/TENASCIN/ANGIOPOEITINInterproscan
PTHR47018CXC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR20920RPE-SPONDINInterproscan
PTHR47963DEAD-BOX ATP-DEPENDENT RNA HELICASE 47, MITOCHONDRIALInterproscan
PTHR11309FRIZZLEDInterproscan
PTHR24040LAMININ G-LIKE DOMAIN-CONTAINING PROTEINInterproscan
PTHR24068UBIQUITIN-CONJUGATING ENZYME E2Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0003724Molecular FunctionRNA helicase activityInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0005840Cellular ComponentribosomeInterproscan
GO:0009409Biological Processresponse to coldInterproscan
GO:0033592Molecular FunctionRNA strand annealing activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0016021Cellular ComponentmembraneInterproscan
GO:0017147Molecular FunctionWnt-protein bindingInterproscan
GO:0035567Biological Processnon-canonical Wnt signaling pathwayInterproscan
GO:0042813Molecular FunctionWnt receptor activityInterproscan
GO:0060070Biological Processcanonical Wnt signaling pathwayInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006974Biological ProcessDNA damage responseInterproscan
GO:0061631Molecular Functionubiquitin conjugating enzyme activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01558WNT16; wingless-type MMTV integration site family, member 16-DNA repair and recombination proteinsko03400deepkoala
Ribosome biogenesisko03009deepkoala
Glycosaminoglycan binding proteinsko00536deepkoala

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