Detailed information of g1299.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: CAB4022377.1, 39S ribosomal L14, mitochondrial [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9D1I6Large ribosomal subunit protein uL14m OS=Mus musculus OX=10090 GN=Mrpl14 PE=1 SV=1
Q7M0E7Large ribosomal subunit protein uL14m OS=Rattus norvegicus OX=10116 GN=Mrpl14 PE=1 SV=2
Q7ZUH5Large ribosomal subunit protein uL14m OS=Danio rerio OX=7955 GN=mrpl14 PE=2 SV=1
Gene familySubfamily
Transcription Factors FamilyHomeobox
Ubiquitin FamilyE3|E3 adaptor Cullin RING|BTB
Transcription Factors Familyzf-C2H2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02786CPSase_L_D2Carbamoyl-phosphate synthase L chain, ATP binding domainDomainInterproscan
PF21385ACCA_BTAcetyl-CoA carboxylase, BT domainDomainInterproscan
PF00289Biotin_carb_NBiotin carboxylase, N-terminal domainDomainInterproscan
PF08326ACC_centralAcetyl-CoA carboxylase, central regionFamilyInterproscan
PF02785Biotin_carb_CBiotin carboxylase C-terminal domainDomainInterproscan
PF00364Biotin_lipoylBiotin-requiring enzymeDomainInterproscan
PF00046HomeodomainHomeodomainDomainInterproscan
PF01351RNase_HIIRibonuclease HIIFamilyInterproscan
PF00096zf-C2H2Zinc finger, C2H2 typeDomainInterproscan
PF03398Ist1Regulator of Vps4 activity in the MVB pathwayFamilyInterproscan
PF10409PTEN_C2C2 domain of PTEN tumour-suppressor proteinDomainInterproscan
PF00102Y_phosphataseProtein-tyrosine phosphataseDomainInterproscan
PF01607CBM_14Chitin binding Peritrophin-A domainDomainInterproscan
PF05773RWDRWD domainDomainInterproscan
PF00805PentapeptidePentapeptide repeats (8 copies)RepeatInterproscan
PF11834KHAKHA, dimerisation domain of potassium ion channelFamilyInterproscan
PF02214BTB_2BTB/POZ domainDomainInterproscan
PF18403Thioredoxin_15Thioredoxin-like domainDomainInterproscan
PF05093CIAPIN1Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesisDomainInterproscan
PF20922Anamorsin_NAnamorsin, N-terminalDomainInterproscan
PF05593RHS_repeatRHS RepeatRepeatInterproscan
PF00238Ribosomal_L14Ribosomal protein L14p/L23eDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016185Homologous_superfamilyPre-ATP-grasp domain superfamilyInterproscan
IPR005479DomainCarbamoyl-phosphate synthetase large subunit-like, ATP-binding domainInterproscan
IPR000089DomainBiotin/lipoyl attachmentInterproscan
IPR005482DomainBiotin carboxylase, C-terminalInterproscan
IPR011764DomainBiotin carboxylation domainInterproscan
IPR049074DomainAcetyl-CoA carboxylase, BT domainInterproscan
IPR049076FamilyAcetyl-CoA carboxylaseInterproscan
IPR005481DomainBiotin carboxylase-like, N-terminal domainInterproscan
IPR011053Homologous_superfamilySingle hybrid motifInterproscan
IPR011054Homologous_superfamilyRudiment single hybrid motifInterproscan
IPR011761DomainATP-grasp foldInterproscan
IPR013537DomainAcetyl-CoA carboxylase, central domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR001356DomainHomeobox domainInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR017970Conserved_siteHomeobox, conserved siteInterproscan
IPR050460FamilyDistal-less homeobox transcription factorsInterproscan
IPR022898FamilyRibonuclease HIIInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR024567DomainRibonuclease HII/HIII domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR001352FamilyRibonuclease HII/HIIIInterproscan
IPR005061FamilyVacuolar protein sorting-associated protein Ist1Interproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR042277Homologous_superfamilyVacuolar protein sorting-associated protein IST1-likeInterproscan
IPR000387DomainTyrosine-specific protein phosphatases domainInterproscan
IPR014020DomainTensin phosphatase, C2 domainInterproscan
IPR029021Homologous_superfamilyProtein-tyrosine phosphatase-likeInterproscan
IPR016130Active_siteProtein-tyrosine phosphatase, active siteInterproscan
IPR051281FamilyDual-specificity lipid and protein phosphataseInterproscan
IPR035892Homologous_superfamilyC2 domain superfamilyInterproscan
IPR000242DomainTyrosine-specific protein phosphatase, PTPase domainInterproscan
IPR027359Homologous_superfamilyVoltage-dependent channel domain superfamilyInterproscan
IPR029023DomainTensin-type phosphatase domainInterproscan
IPR036508Homologous_superfamilyChitin binding domain superfamilyInterproscan
IPR002557DomainChitin binding domainInterproscan
IPR016135Homologous_superfamilyUbiquitin-conjugating enzyme/RWD-likeInterproscan
IPR006575DomainRWD domainInterproscan
IPR051082FamilyPentapeptide repeat and BTB/POZ domain-containing proteinInterproscan
IPR000210DomainBTB/POZ domainInterproscan
IPR001646RepeatPentapeptide repeatInterproscan
IPR021789DomainKHA domainInterproscan
IPR011333Homologous_superfamilySKP1/BTB/POZ domain superfamilyInterproscan
IPR003131DomainPotassium channel tetramerisation-type BTB domainInterproscan
IPR040525DomainUDP-glucose:glycoprotein glucosyltransferase, thioredoxin-like domain 4Interproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR007785FamilyAnamorsinInterproscan
IPR046408DomainAnamorsin, C-terminalInterproscan
IPR049011DomainAnamorsin, N-terminal domain, metazoan-typeInterproscan
IPR031325RepeatRHS repeatInterproscan
IPR006530RepeatYD repeatInterproscan
IPR036853Homologous_superfamilyLarge ribosomal subunit protein uL14 superfamilyInterproscan
IPR000218FamilyLarge ribosomal subunit protein uL14Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45728ACETYL-COA CARBOXYLASE, ISOFORM AInterproscan
PTHR24327HOMEOBOX PROTEINInterproscan
PTHR10954RIBONUCLEASE H2 SUBUNIT AInterproscan
PTHR12161IST1 FAMILY MEMBERInterproscan
PTHR12305PHOSPHATASE WITH HOMOLOGY TO TENSINInterproscan
PTHR14136UNCHARACTERIZEDInterproscan
PTHR13273ANAMORSINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0003989Molecular Functionacetyl-CoA carboxylase activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0006633Biological Processfatty acid biosynthetic processInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0004523Molecular FunctionRNA-DNA hybrid ribonuclease activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0006298Biological Processmismatch repairInterproscan
GO:0032299Cellular Componentribonuclease H2 complexInterproscan
GO:0043137Biological ProcessDNA replication, removal of RNA primerInterproscan
GO:0008104Biological Processprotein localizationInterproscan
GO:0015031Biological Processprotein transportInterproscan
GO:0016311Biological ProcessdephosphorylationInterproscan
GO:0004725Molecular Functionprotein tyrosine phosphatase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0006470Biological Processprotein dephosphorylationInterproscan
GO:0008285Biological Processnegative regulation of cell population proliferationInterproscan
GO:0014065Biological Processobsolete phosphatidylinositol 3-kinase signalingInterproscan
GO:0016314Molecular Functionphosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activityInterproscan
GO:0042995Cellular Componentcell projectionInterproscan
GO:0046856Biological Processphosphatidylinositol dephosphorylationInterproscan
GO:0048870Biological Processcell motilityInterproscan
GO:0051896Biological Processregulation of phosphatidylinositol 3-kinase/protein kinase B signal transductionInterproscan
GO:0008061Molecular Functionchitin bindingInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0051260Biological Processprotein homooligomerizationInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0016226Biological Processiron-sulfur cluster assemblyInterproscan
GO:0051536Molecular Functioniron-sulfur cluster bindingInterproscan
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840Cellular ComponentribosomeInterproscan
GO:0006412Biological ProcesstranslationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03470rnhB; ribonuclease HIIEC:3.1.26.4
Ribosomeko03011deepkoala
Endocytosisko04144deepkoala
Ubiquitin systemko04121deepkoala
Protein phosphatases and associated proteinsko01009deepkoala
DNA replication proteinsko03032deepkoala

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