Gene detail

Detailed information of g1303.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: CAH3025877.1, unnamed protein product [Porites evermanni]
Species abbreviation CCRUX · all data for this species · gene families

Sequence

Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q2KI89	LisH domain-containing protein ARMC9 OS=Bos taurus OX=9913 GN=ARMC9 PE=2 SV=1
A1A5P5	LisH domain-containing protein ARMC9 OS=Rattus norvegicus OX=10116 GN=Armc9 PE=2 SV=1
Q5R629	LisH domain-containing protein ARMC9 OS=Pongo abelii OX=9601 GN=ARMC9 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000010 (this species only)
Orthogroup (gene family)	OG0000137 (this species only)
Orthogroup (gene family)	OG0000589 (this species only)
Orthogroup (gene family)	OG0003113 (this species only)
Orthogroup (gene family)	OG0003385 (this species only)
Orthogroup (gene family)	OG0003427 (this species only)
Orthogroup (gene family)	OG0003768 (this species only)
Orthogroup (gene family)	OG0005784 (this species only)
Orthogroup (gene family)	OG0005954 (this species only)
Orthogroup (gene family)	OG0007110 (this species only)
Orthogroup (gene family)	OG0008326 (this species only)
Orthogroup (gene family)	OG0012106 (this species only)
Orthogroup (gene family)	OG0014948 (this species only)
Orthogroup (gene family)	OG0172354 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan
PF00084 all species →	Sushi	Sushi repeat (SCR repeat)	Domain	Interproscan
PF00092 all species →	VWA	von Willebrand factor type A domain	Domain	Interproscan
PF03155 all species →	Alg6_Alg8	ALG6, ALG8 glycosyltransferase family	Family	Interproscan
PF21051 all species →	ARMC9_LisH	ARMC9, LIS1 homology motif	Domain	Interproscan
PF21050 all species →	ARMC9_ARM	LisH domain-containing protein ARMC9, ARM repeats	Repeat	Interproscan
PF00822 all species →	PMP22_Claudin	PMP-22/EMP/MP20/Claudin family	Family	Interproscan
PF13419 all species →	HAD_2	Haloacid dehalogenase-like hydrolase	Family	Interproscan
PF01663 all species →	Phosphodiest	Type I phosphodiesterase / nucleotide pyrophosphatase	Family	Interproscan
PF09777 all species →	OSTMP1	Osteopetrosis-associated transmembrane protein 1 precursor	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR038797 all species →	Family	Protein Flattop	Interproscan
IPR001584 all species →	Domain	Integrase, catalytic core	Interproscan
IPR052160 all species →	Family	Gypsy Retrotransposon Integrase-like	Interproscan
IPR036397 all species →	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR012337 all species →	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR051302 all species →	Family	Dual Ser/Thr and Tyr Protein Kinase	Interproscan
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR008271 all species →	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR002035 all species →	Domain	von Willebrand factor, type A	Interproscan
IPR035976 all species →	Homologous_superfamily	Sushi/SCR/CCP superfamily	Interproscan
IPR000436 all species →	Domain	Sushi/SCR/CCP domain	Interproscan
IPR036465 all species →	Homologous_superfamily	von Willebrand factor A-like domain superfamily	Interproscan
IPR050350 all species →	Family	Complement & Cell Adhesion Regulators	Interproscan
IPR004856 all species →	Family	Glycosyl transferase, ALG6/ALG8	Interproscan
IPR036291 all species →	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR044516 all species →	Family	UDP-glucuronic acid decarboxylase	Interproscan
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR048957 all species →	Conserved_site	ARMC9, LIS1 homology motif	Interproscan
IPR048959 all species →	Domain	LisH domain-containing protein ARMC9, ARM repeat domain	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR040369 all species →	Family	LisH domain-containing protein ARMC9	Interproscan
IPR006594 all species →	Conserved_site	LIS1 homology motif	Interproscan
IPR004031 all species →	Family	PMP-22/EMP/MP20/Claudin	Interproscan
IPR050579 all species →	Family	Peripheral Myelin Protein 22/Epithelial Membrane Protein	Interproscan
IPR051400 all species →	Family	HAD-like hydrolase superfamily enzymes	Interproscan
IPR036412 all species →	Homologous_superfamily	HAD-like superfamily	Interproscan
IPR006439 all species →	Family	HAD hydrolase, subfamily IA	Interproscan
IPR023214 all species →	Homologous_superfamily	HAD superfamily	Interproscan
IPR041492 all species →	Family	Haloacid dehalogenase-like hydrolase	Interproscan
IPR002591 all species →	Family	Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase	Interproscan
IPR039524 all species →	Family	GPI ethanolamine phosphate transferase 3	Interproscan
IPR017850 all species →	Homologous_superfamily	Alkaline-phosphatase-like, core domain superfamily	Interproscan
IPR037675 all species →	Domain	GPI ethanolamine phosphate transferase 3, N-terminal	Interproscan
IPR019172 all species →	Family	Osteopetrosis-associated transmembrane protein 1 precursor	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR34639 all species →	PROTEIN FLATTOP	Interproscan
PTHR47266 all species →	ENDONUCLEASE-RELATED	Interproscan
PTHR46392 all species →	DUAL SERINE/THREONINE AND TYROSINE PROTEIN KINASE	Interproscan
PTHR19325 all species →	COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING	Interproscan
PTHR12413 all species →	DOLICHYL GLYCOSYLTRANSFERASE	Interproscan
PTHR43078 all species →	UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED	Interproscan
PTHR14881 all species →	LISH DOMAIN-CONTAINING PROTEIN ARMC9	Interproscan
PTHR10671 all species →	EPITHELIAL MEMBRANE PROTEIN-RELATED	Interproscan
PTHR46470 all species →	N-ACYLNEURAMINATE-9-PHOSPHATASE	Interproscan
PTHR23071 all species →	PHOSPHATIDYLINOSITOL GLYCAN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0036064 all species →	Cellular Component	ciliary basal body	Interproscan
GO:0044782 all species →	Biological Process	cilium organization	Interproscan
GO:0015074 all species →	Biological Process	DNA integration	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0043066 all species →	Biological Process	negative regulation of apoptotic process	Interproscan
GO:0044344 all species →	Biological Process	cellular response to fibroblast growth factor stimulus	Interproscan
GO:0045743 all species →	Biological Process	positive regulation of fibroblast growth factor receptor signaling pathway	Interproscan
GO:0070374 all species →	Biological Process	positive regulation of ERK1 and ERK2 cascade	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0005789 all species →	Cellular Component	endoplasmic reticulum membrane	Interproscan
GO:0006487 all species →	Biological Process	protein N-linked glycosylation	Interproscan
GO:0006490 all species →	Biological Process	obsolete oligosaccharide-lipid intermediate biosynthetic process	Interproscan
GO:0016758 all species →	Molecular Function	hexosyltransferase activity	Interproscan
GO:0042283 all species →	Molecular Function	dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase activity	Interproscan
GO:0042732 all species →	Biological Process	D-xylose metabolic process	Interproscan
GO:0048040 all species →	Molecular Function	UDP-glucuronate decarboxylase activity	Interproscan
GO:0070403 all species →	Molecular Function	NAD+ binding	Interproscan
GO:0005814 all species →	Cellular Component	centriole	Interproscan
GO:0060271 all species →	Biological Process	cilium assembly	Interproscan
GO:0097542 all species →	Cellular Component	ciliary tip	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0016311 all species →	Biological Process	dephosphorylation	Interproscan
GO:0016791 all species →	Molecular Function	phosphatase activity	Interproscan
GO:0046380 all species →	Biological Process	N-acetylneuraminate biosynthetic process	Interproscan
GO:0050124 all species →	Molecular Function	N-acylneuraminate-9-phosphatase activity	Interproscan
GO:0006506 all species →	Biological Process	GPI anchor biosynthetic process	Interproscan
GO:0016772 all species →	Molecular Function	transferase activity, transferring phosphorus-containing groups	Interproscan
GO:0051377 all species →	Molecular Function	mannose-ethanolamine phosphotransferase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01097	NANP; N-acylneuraminate-9-phosphatase	EC:3.1.3.29	Protein phosphatases and associated proteins	ko01009	deepkoala
K16288	DSTYK, RIPK5; dual serine/threonine and tyrosine protein kinase	EC:2.7.12.1	Protein kinases	ko01001	deepkoala
K22864	ARMC9; LisH domain-containing protein ARMC9	-	Cilium and associated proteins	ko03037	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.