Gene detail

Detailed information of g13053.t1.1 in Montipora cactus

Genomic Location: :...
NR annotation: XP_015772278.1, PREDICTED: rap guanine nucleotide exchange factor 4-like [Acropora digitifera]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q8WZA2	Rap guanine nucleotide exchange factor 4 OS=Homo sapiens OX=9606 GN=RAPGEF4 PE=1 SV=1
Q9EQZ6	Rap guanine nucleotide exchange factor 4 OS=Mus musculus OX=10090 GN=Rapgef4 PE=1 SV=1
Q5ZLG1	Ras-related protein Rab-18 OS=Gallus gallus OX=9031 GN=RAB18 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00610	DEP	Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)	Domain	Interproscan
PF00071	Ras	Ras family	Domain	Interproscan
PF00027	cNMP_binding	Cyclic nucleotide-binding domain	Domain	Interproscan
PF00617	RasGEF	RasGEF domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000595	Domain	Cyclic nucleotide-binding domain	Interproscan
IPR005225	Domain	Small GTP-binding protein domain	Interproscan
IPR023578	Homologous_superfamily	Ras guanine nucleotide exchange factor domain superfamily	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR018490	Homologous_superfamily	Cyclic nucleotide-binding domain superfamily	Interproscan
IPR000591	Domain	DEP domain	Interproscan
IPR014710	Homologous_superfamily	RmlC-like jelly roll fold	Interproscan
IPR001806	Family	Small GTPase	Interproscan
IPR036964	Homologous_superfamily	Ras guanine-nucleotide exchange factor, catalytic domain superfamily	Interproscan
IPR001895	Domain	Ras guanine-nucleotide exchange factors catalytic domain	Interproscan
IPR025662	Binding_site	Sigma-54 interaction domain, ATP-binding site 1	Interproscan
IPR050227	Family	Ras-related protein Rab	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR036390	Homologous_superfamily	Winged helix DNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47977	RAS-RELATED PROTEIN RAB	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005525	Molecular Function	GTP binding	Interproscan
GO:0035556	Biological Process	intracellular signal transduction	Interproscan
GO:0003924	Molecular Function	GTPase activity	Interproscan
GO:0005085	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0007264	Biological Process	small GTPase-mediated signal transduction	Interproscan
GO:0016192	Biological Process	vesicle-mediated transport	Interproscan