Gene detail

Detailed information of g1306.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: XP_046851188.1, uncharacterized protein LOC124444618 isoform X1 [Xenia sp. Carnegie-2017]
Species abbreviation CCRUX · all data for this species · gene families

Sequence

Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q05469	Hormone-sensitive lipase OS=Homo sapiens OX=9606 GN=LIPE PE=1 SV=4
Q9R101	Hormone-sensitive lipase OS=Ictidomys tridecemlineatus OX=43179 GN=LIPE PE=2 SV=1
Q68J42	Hormone-sensitive lipase OS=Sus scrofa OX=9823 GN=LIPE PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002078 (this species only)
Orthogroup (gene family)	OG0006016 (this species only)
Orthogroup (gene family)	OG0006337 (this species only)
Orthogroup (gene family)	OG0008317 (this species only)
Orthogroup (gene family)	OG0019282 (this species only)
Orthogroup (gene family)	OG0024075 (this species only)
Orthogroup (gene family)	OG0041275 (this species only)
Orthogroup (gene family)	OG0059574 (this species only)
Orthogroup (gene family)	OG0080365 (this species only)
Orthogroup (gene family)	OG0080441 (this species only)
Orthogroup (gene family)	OG0171136 (this species only)
Orthogroup (gene family)	OG0171415 (this species only)
Orthogroup (gene family)	OG0171660 (this species only)
Orthogroup (gene family)	OG0172496 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12352 all species →	V-SNARE_C	Snare region anchored in the vesicle membrane C-terminus	Domain	Interproscan
PF05008 all species →	V-SNARE	Vesicle transport v-SNARE protein N-terminus	Family	Interproscan
PF17135 all species →	Ribosomal_L18	Ribosomal protein 60S L18 and 50S L18e	Family	Interproscan
PF00078 all species →	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF06350 all species →	HSL_N	Hormone-sensitive lipase (HSL) N-terminus	Family	Interproscan
PF07859 all species →	Abhydrolase_3	alpha/beta hydrolase fold	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR038407 all species →	Homologous_superfamily	Vesicle transport v-SNARE, N-terminal domain superfamily	Interproscan
IPR000727 all species →	Domain	Target SNARE coiled-coil homology domain	Interproscan
IPR007705 all species →	Domain	Vesicle transport v-SNARE, N-terminal	Interproscan
IPR010989 all species →	Homologous_superfamily	SNARE	Interproscan
IPR021132 all species →	Conserved_site	Large ribosomal subunit protein eL18, conserved site	Interproscan
IPR000039 all species →	Family	Large ribosomal subunit protein eL18	Interproscan
IPR021131 all species →	Domain	Large ribosomal subunit protein uL15/eL18	Interproscan
IPR036227 all species →	Homologous_superfamily	Large ribosomal subunit protein uL15/eL18 superfamily	Interproscan
IPR000477 all species →	Domain	Reverse transcriptase domain	Interproscan
IPR043128 all species →	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR043502 all species →	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR029058 all species →	Homologous_superfamily	Alpha/Beta hydrolase fold	Interproscan
IPR010468 all species →	Domain	Hormone-sensitive lipase, N-terminal	Interproscan
IPR013094 all species →	Domain	Alpha/beta hydrolase fold-3	Interproscan
IPR033140 all species →	Active_site	Lipase, GDXG, putative serine active site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21230 all species →	VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED	Interproscan
PTHR10934 all species →	60S RIBOSOMAL PROTEIN L18	Interproscan
PTHR33332 all species →	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR23025 all species →	TRIACYLGLYCEROL LIPASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000149 all species →	Molecular Function	SNARE binding	Interproscan
GO:0005484 all species →	Molecular Function	SNAP receptor activity	Interproscan
GO:0005789 all species →	Cellular Component	endoplasmic reticulum membrane	Interproscan
GO:0005794 all species →	Cellular Component	Golgi apparatus	Interproscan
GO:0006891 all species →	Biological Process	intra-Golgi vesicle-mediated transport	Interproscan
GO:0006896 all species →	Biological Process	Golgi to vacuole transport	Interproscan
GO:0006906 all species →	Biological Process	vesicle fusion	Interproscan
GO:0012507 all species →	Cellular Component	ER to Golgi transport vesicle membrane	Interproscan
GO:0016236 all species →	Biological Process	macroautophagy	Interproscan
GO:0031201 all species →	Cellular Component	SNARE complex	Interproscan
GO:0031902 all species →	Cellular Component	late endosome membrane	Interproscan
GO:0042147 all species →	Biological Process	retrograde transport, endosome to Golgi	Interproscan
GO:0048280 all species →	Biological Process	vesicle fusion with Golgi apparatus	Interproscan
GO:1903076 all species →	Biological Process	regulation of protein localization to plasma membrane	Interproscan
GO:0006886 all species →	Biological Process	intracellular protein transport	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0016192 all species →	Biological Process	vesicle-mediated transport	Interproscan
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840 all species →	Cellular Component	ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0022625 all species →	Cellular Component	cytosolic large ribosomal subunit	Interproscan
GO:0008203 all species →	Biological Process	cholesterol metabolic process	Interproscan
GO:0016042 all species →	Biological Process	lipid catabolic process	Interproscan
GO:0016298 all species →	Molecular Function	lipase activity	Interproscan
GO:0004771 all species →	Molecular Function	sterol ester esterase activity	Interproscan
GO:0004806 all species →	Molecular Function	triacylglycerol lipase activity	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0019433 all species →	Biological Process	triglyceride catabolic process	Interproscan
GO:0016787 all species →	Molecular Function	hydrolase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02883	RP-L18e, RPL18; large subunit ribosomal protein L18e	-	Ribosome	ko03011	deepkoala
K07188	LIPE, HSL; hormone-sensitive lipase	EC:3.1.1.79	Thermogenesis	ko04714	deepkoala
K08493	VTI1; vesicle transport through interaction with t-SNAREs 1	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.