Detailed information of g1307.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: KAG7477685.1, hypothetical protein MATL_G00072180 [Megalops atlanticus]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P98160Basement membrane-specific heparan sulfate proteoglycan core protein OS=Homo sapiens OX=9606 GN=HSPG2 PE=1 SV=4
Q05793Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1
P13595Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=3
Gene familySubfamily
Transcription Factors FamilyTHAP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00047igImmunoglobulin domainDomainInterproscan
PF07679I-setImmunoglobulin I-set domainDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan
PF13843DDE_Tnp_1_7Transposase IS4DomainInterproscan
PF13842Tnp_zf-ribbon_2DDE_Tnp_1-like zinc-ribbonDomainInterproscan
PF05485THAPTHAP domainDomainInterproscan
PF001982-oxoacid_dh2-oxoacid dehydrogenases acyltransferase (catalytic domain)DomainInterproscan
PF18428BRCT_3BRCA1 C Terminus (BRCT) domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR000034DomainLaminin IVInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR013151DomainImmunoglobulinInterproscan
IPR051275FamilyCellular adhesion and signaling domain-containing proteinInterproscan
IPR013098DomainImmunoglobulin I-setInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR023346Homologous_superfamilyLysozyme-like domain superfamilyInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR029526DomainPiggyBac transposable element-derived proteinInterproscan
IPR032718DomainPiggyBac transposable element-derived protein 4, C-terminal zinc-ribbonInterproscan
IPR052224FamilyTHAP domain-containing proteinInterproscan
IPR006612DomainTHAP-type zinc fingerInterproscan
IPR038441Homologous_superfamilyTHAP-type zinc finger superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR050537Family2-oxoacid dehydrogenaseInterproscan
IPR001078Domain2-oxoacid dehydrogenase acyltransferase, catalytic domainInterproscan
IPR023213Homologous_superfamilyChloramphenicol acetyltransferase-like domain superfamilyInterproscan
IPR036420Homologous_superfamilyBRCT domain superfamilyInterproscan
IPR047252FamilyTP53-binding protein 1-likeInterproscan
IPR001357DomainBRCT domainInterproscan
IPR047250DomainTP53-binding protein 1-like, second BRCT domainInterproscan
IPR047249DomainTP53-binding protein 1-like, first BRCT domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11640NEPHRINInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR46599PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4Interproscan
PTHR46927AGAP005574-PAInterproscan
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR43416DIHYDROLIPOYLLYSINE-RESIDUE SUCCINYLTRANSFERASE COMPONENT OF 2-OXOGLUTARATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL-RELATEDInterproscan
PTHR15321TUMOR SUPPRESSOR P53-BINDING PROTEIN 1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0005911Cellular Componentcell-cell junctionInterproscan
GO:0050839Molecular Functioncell adhesion molecule bindingInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0004149Molecular Functiondihydrolipoyllysine-residue succinyltransferase activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0006099Biological Processtricarboxylic acid cycleInterproscan
GO:0016746Molecular Functionacyltransferase activityInterproscan
GO:0000077Biological ProcessDNA damage checkpoint signalingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0042393Molecular Functionhistone bindingInterproscan
GO:0045944Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan

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