Gene detail

Detailed information of g131.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: XP_012556663.1, potassium voltage-gated channel subfamily A member 2 [Hydra vulgaris]
Species abbreviation CCRUX · all data for this species · gene families

Sequence

Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P08510	Potassium voltage-gated channel protein Shaker OS=Drosophila melanogaster OX=7227 GN=Sh PE=1 SV=3
P16389	Potassium voltage-gated channel subfamily A member 2 OS=Homo sapiens OX=9606 GN=KCNA2 PE=1 SV=2
Q09081	Potassium voltage-gated channel subfamily A member 2 OS=Oryctolagus cuniculus OX=9986 GN=KCNA2 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000013 (this species only)
Orthogroup (gene family)	OG0000030 (this species only)
Orthogroup (gene family)	OG0000129 (this species only)
Orthogroup (gene family)	OG0000934 (this species only)
Orthogroup (gene family)	OG0001861 (this species only)
Orthogroup (gene family)	OG0002234 (this species only)
Orthogroup (gene family)	OG0003508 (this species only)
Orthogroup (gene family)	OG0005961 (this species only)
Orthogroup (gene family)	OG0008987 (this species only)
Orthogroup (gene family)	OG0009086 (this species only)
Orthogroup (gene family)	OG0025839 (this species only)
Orthogroup (gene family)	OG0032558 (this species only)
Orthogroup (gene family)	OG0036198 (this species only)
Orthogroup (gene family)	OG0080426 (this species only)
Orthogroup (gene family)	OG0173579 (this species only)
Ubiquitin family	ULD\|UFD\|PB1 · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03564 all species →	DUF1759	Protein of unknown function (DUF1759)	Family	Interproscan
PF02214 all species →	BTB_2	BTB/POZ domain	Domain	Interproscan
PF00520 all species →	Ion_trans	Ion transport protein	Family	Interproscan
PF10300 all species →	Iml2-TPR_39	Iml2/Tetratricopeptide repeat protein 39	Repeat	Interproscan
PF00147 all species →	Fibrinogen_C	Fibrinogen beta and gamma chains, C-terminal globular domain	Domain	Interproscan
PF00564 all species →	PB1	PB1 domain	Domain	Interproscan
PF16577 all species →	UBA_5	UBA domain	Domain	Interproscan
PF00569 all species →	ZZ	Zinc finger, ZZ type	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011106 all species →	Domain	Seven cysteines, N-terminal	Interproscan
IPR029865 all species →	Family	Dyslexia-associated protein KIAA0319-like	Interproscan
IPR005312 all species →	Family	Protein of unknown function DUF1759	Interproscan
IPR036875 all species →	Homologous_superfamily	Zinc finger, CCHC-type superfamily	Interproscan
IPR001878 all species →	Domain	Zinc finger, CCHC-type	Interproscan
IPR001969 all species →	Active_site	Aspartic peptidase, active site	Interproscan
IPR040246 all species →	Family	UPF0547 protein C16orf87-like	Interproscan
IPR036691 all species →	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR006585 all species →	Domain	Fucolectin tachylectin-4 pentraxin-1	Interproscan
IPR051941 all species →	Family	Blood Group Antigen-Binding Lectin	Interproscan
IPR008979 all species →	Homologous_superfamily	Galactose-binding-like domain superfamily	Interproscan
IPR011333 all species →	Homologous_superfamily	SKP1/BTB/POZ domain superfamily	Interproscan
IPR027359 all species →	Homologous_superfamily	Voltage-dependent channel domain superfamily	Interproscan
IPR003968 all species →	Family	Potassium channel, voltage dependent, Kv	Interproscan
IPR003131 all species →	Domain	Potassium channel tetramerisation-type BTB domain	Interproscan
IPR003972 all species →	Family	Potassium channel, voltage dependent, Kv1	Interproscan
IPR005821 all species →	Domain	Ion transport domain	Interproscan
IPR000210 all species →	Domain	BTB/POZ domain	Interproscan
IPR019412 all species →	Family	Inclusion body clearance protein Iml2/Tetratricopeptide repeat protein 39	Interproscan
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR002181 all species →	Domain	Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain	Interproscan
IPR014716 all species →	Homologous_superfamily	Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1	Interproscan
IPR036056 all species →	Homologous_superfamily	Fibrinogen-like, C-terminal	Interproscan
IPR050373 all species →	Family	Fibrinogen C-terminal domain-containing protein	Interproscan
IPR020837 all species →	Conserved_site	Fibrinogen, conserved site	Interproscan
IPR000571 all species →	Domain	Zinc finger, CCCH-type	Interproscan
IPR043145 all species →	Homologous_superfamily	Zinc finger, ZZ-type superfamily	Interproscan
IPR000433 all species →	Domain	Zinc finger, ZZ-type	Interproscan
IPR000270 all species →	Domain	PB1 domain	Interproscan
IPR033741 all species →	Domain	Sequestosome-1, UBA domain	Interproscan
IPR052260 all species →	Family	Autophagy Receptor and Signaling Regulator	Interproscan
IPR009060 all species →	Homologous_superfamily	UBA-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46182 all species →	FI19480P1	Interproscan
PTHR47331 all species →	PHD-TYPE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR31101 all species →	UPF0547 PROTEIN C16ORF87	Interproscan
PTHR45713 all species →	FTP DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR11537 all species →	VOLTAGE-GATED POTASSIUM CHANNEL	Interproscan
PTHR23159 all species →	CENTROSOMAL PROTEIN 2	Interproscan
PTHR31859 all species →	TETRATRICOPEPTIDE REPEAT PROTEIN 39 FAMILY MEMBER	Interproscan
PTHR19143 all species →	FIBRINOGEN/TENASCIN/ANGIOPOEITIN	Interproscan
PTHR12675 all species →	MUSCLEBLIND-LIKE PROTEIN	Interproscan
PTHR15090 all species →	SEQUESTOSOME 1-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0001764 all species →	Biological Process	neuron migration	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0031410 all species →	Cellular Component	cytoplasmic vesicle	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0004190 all species →	Molecular Function	aspartic-type endopeptidase activity	Interproscan
GO:0006508 all species →	Biological Process	proteolysis	Interproscan
GO:0005249 all species →	Molecular Function	voltage-gated potassium channel activity	Interproscan
GO:0005251 all species →	Molecular Function	delayed rectifier potassium channel activity	Interproscan
GO:0008076 all species →	Cellular Component	voltage-gated potassium channel complex	Interproscan
GO:0016021 all species →	Cellular Component	membrane	Interproscan
GO:0071805 all species →	Biological Process	potassium ion transmembrane transport	Interproscan
GO:0006813 all species →	Biological Process	potassium ion transport	Interproscan
GO:0051260 all species →	Biological Process	protein homooligomerization	Interproscan
GO:0005216 all species →	Molecular Function	monoatomic ion channel activity	Interproscan
GO:0006811 all species →	Biological Process	monoatomic ion transport	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0060271 all species →	Biological Process	cilium assembly	Interproscan
GO:0005615 all species →	Cellular Component	extracellular space	Interproscan
GO:0062023 all species →	Cellular Component	collagen-containing extracellular matrix	Interproscan
GO:0046872 all species →	Molecular Function	metal ion binding	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0043484 all species →	Biological Process	regulation of RNA splicing	Interproscan
GO:0000423 all species →	Biological Process	mitophagy	Interproscan
GO:0005080 all species →	Molecular Function	protein kinase C binding	Interproscan
GO:0007032 all species →	Biological Process	endosome organization	Interproscan
GO:0016235 all species →	Cellular Component	aggresome	Interproscan
GO:0035973 all species →	Biological Process	aggrephagy	Interproscan
GO:0044753 all species →	Cellular Component	amphisome	Interproscan
GO:0070530 all species →	Molecular Function	K63-linked polyubiquitin modification-dependent protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K04874	KCNA1, KV1.1; potassium voltage-gated channel Shaker-related subfamily A member 1	-	Ion channels	ko04040	deepkoala
K10104	FCN; ficolin	-	Lectins	ko04091	deepkoala
K10373	TPM1; tropomyosin 1	-	Exosome	ko04147	deepkoala
K14381	SQSTM1; sequestosome 1	-	Exosome	ko04147	deepkoala
K14943	MBNL; muscleblind	-	Spliceosome	ko03041	deepkoala
K24943	TTC39; tetratricopeptide repeat protein 39	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.