Detailed information of g13101.t1 in Montipora capitata

Genomic Location: Sc0000440:1080...13780
NR annotation: XP_015775616.1, PREDICTED: parafibromin-like [Acropora digitifera]
Species abbreviation MCAPI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5ZLM0Parafibromin OS=Gallus gallus OX=9031 GN=CDC73 PE=2 SV=1
Q6P1J9Parafibromin OS=Homo sapiens OX=9606 GN=CDC73 PE=1 SV=1
Q8JZM7Parafibromin OS=Mus musculus OX=10090 GN=Cdc73 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005352 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16050
all species →
CDC73_NPaf1 complex subunit CDC73 N-terminalFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007852
all species →
FamilyCdc73/ParafibrominInterproscan
IPR032041
all species →
DomainPaf1 complex subunit Cdc73, N-terminal domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12466
all species →
CDC73 DOMAIN PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000993
all species →
Molecular FunctionRNA polymerase II complex bindingInterproscan
GO:0006368
all species →
Biological Processtranscription elongation by RNA polymerase IIInterproscan
GO:0016593
all species →
Cellular ComponentCdc73/Paf1 complexInterproscan
GO:0032968
all species →
Biological Processpositive regulation of transcription elongation by RNA polymerase IIInterproscan
GO:0034402
all species →
Biological Processobsolete recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g13101.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP