Detailed information of g1311.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_038046702.1, uncharacterized protein LOC119720907 [Patiria miniata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9CZJ1Probable U3 small nucleolar RNA-associated protein 11 OS=Mus musculus OX=10090 GN=Utp11 PE=2 SV=1
Q9Y3A2Probable U3 small nucleolar RNA-associated protein 11 OS=Homo sapiens OX=9606 GN=UTP11 PE=1 SV=2
Q8R5K5Probable U3 small nucleolar RNA-associated protein 11 OS=Rattus norvegicus OX=10116 GN=Utp11 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00629MAMMAM domain, meprin/A5/muDomainInterproscan
PF01400AstacinAstacin (Peptidase family M12A)DomainInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF00498FHAFHA domainFamilyInterproscan
PF03998Utp11Utp11 proteinFamilyInterproscan
PF00027cNMP_bindingCyclic nucleotide-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR000998DomainMAM domainInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR001506DomainPeptidase M12AInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR006026DomainPeptidase, metallopeptidaseInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR034035DomainAstacin-like metallopeptidase domainInterproscan
IPR000253DomainForkhead-associated (FHA) domainInterproscan
IPR008984Homologous_superfamilySMAD/FHA domain superfamilyInterproscan
IPR050923FamilyCellular Process Regulator and RNA Processing ProteinInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan
IPR007144FamilySmall-subunit processome, Utp11Interproscan
IPR000315DomainB-box-type zinc fingerInterproscan
IPR038446Homologous_superfamilyCEBP, ZZ domain superfamilyInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR037688FamilyZinc finger B-box domain-containing proteinInterproscan
IPR002374FamilycGMP-dependent kinaseInterproscan
IPR000595DomainCyclic nucleotide-binding domainInterproscan
IPR018490Homologous_superfamilyCyclic nucleotide-binding domain superfamilyInterproscan
IPR018488Conserved_siteCyclic nucleotide-binding, conserved siteInterproscan
IPR014710Homologous_superfamilyRmlC-like jelly roll foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR10127DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAININGInterproscan
PTHR23308NUCLEAR INHIBITOR OF PROTEIN PHOSPHATASE-1Interproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR23227BUCENTAUR RELATEDInterproscan
PTHR12838U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 11Interproscan
PTHR46601ULP_PROTEASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR28634ZINC FINGER B-BOX DOMAIN-CONTAINING PROTEIN 1Interproscan
PTHR24353CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0035196Biological ProcessmiRNA processingInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0006364Biological ProcessrRNA processingInterproscan
GO:0032040Cellular Componentsmall-subunit processomeInterproscan
GO:0004692Molecular FunctioncGMP-dependent protein kinase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13108SNIP1; smad nuclear-interacting protein 1-Ribosome biogenesisko03009deepkoala
Insulin signaling pathwayko04910deepkoala
Spliceosomeko03041deepkoala

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