Detailed information of g13128.t1 in Montipora capitata

Genomic Location: Sc0000442:25082...31105
NR annotation: XP_029190906.2, hemicentin-2-like [Acropora millepora]
Species Montipora capitata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9Y6N7Roundabout homolog 1 OS=Homo sapiens OX=9606 GN=ROBO1 PE=1 SV=1
O89026Roundabout homolog 1 OS=Mus musculus OX=10090 GN=Robo1 PE=1 SV=1
O55005Roundabout homolog 1 OS=Rattus norvegicus OX=10116 GN=Robo1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001157 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13927
all species →		Ig_3Immunoglobulin domainDomainInterproscan
PF00084
all species →		SushiSushi repeat (SCR repeat)DomainInterproscan
PF01391
all species →		CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036179
all species →		Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR050964
all species →		FamilyStriated Muscle Structural and Regulatory ProteinInterproscan
IPR000436
all species →		DomainSushi/SCR/CCP domainInterproscan
IPR006571
all species →		DomainTLDc domainInterproscan
IPR007110
all species →		DomainImmunoglobulin-like domainInterproscan
IPR003599
all species →		DomainImmunoglobulin subtypeInterproscan
IPR035976
all species →		Homologous_superfamilySushi/SCR/CCP superfamilyInterproscan
IPR013783
all species →		Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR003598
all species →		DomainImmunoglobulin subtype 2Interproscan
IPR008160
all species →		RepeatCollagen triple helix repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13817
all species →		TITINInterproscan

 Gene Ontology
No Gene Ontology signature was detected for g13128.t1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g13128.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP