Gene detail

Detailed information of g1316.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_047134045.1, plancitoxin-1 [Hydra vulgaris]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q17778	Deoxyribonuclease-2 OS=Caenorhabditis elegans OX=6239 GN=nuc-1 PE=3 SV=1
O00115	Deoxyribonuclease-2-alpha OS=Homo sapiens OX=9606 GN=DNASE2 PE=1 SV=2
O62855	Deoxyribonuclease-2-alpha OS=Sus scrofa OX=9823 GN=DNASE2 PE=1 SV=1

Gene family	Subfamily
Transcription Factors Family	zf-BED

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00107	ADH_zinc_N	Zinc-binding dehydrogenase	Domain	Interproscan
PF08240	ADH_N	Alcohol dehydrogenase GroES-like domain	Domain	Interproscan
PF02892	zf-BED	BED zinc finger	Domain	Interproscan
PF19057	PH_19	PH domain	Domain	Interproscan
PF13833	EF-hand_8	EF-hand domain pair	Domain	Interproscan
PF13499	EF-hand_7	EF-hand domain pair	Domain	Interproscan
PF01699	Na_Ca_ex	Sodium/calcium exchanger protein	Family	Interproscan
PF03265	DNase_II	Deoxyribonuclease II	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR050129	Family	Zinc-containing alcohol dehydrogenase	Interproscan
IPR002328	Conserved_site	Alcohol dehydrogenase, zinc-type, conserved site	Interproscan
IPR020843	Domain	Polyketide synthase, enoylreductase domain	Interproscan
IPR011032	Homologous_superfamily	GroES-like superfamily	Interproscan
IPR013149	Domain	Alcohol dehydrogenase-like, C-terminal	Interproscan
IPR013154	Domain	Alcohol dehydrogenase-like, N-terminal	Interproscan
IPR036291	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR003656	Domain	Zinc finger, BED-type	Interproscan
IPR036236	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan
IPR052035	Family	Zinc finger BED domain-containing	Interproscan
IPR039919	Family	Rho guanine nucleotide exchange factor 10/17	Interproscan
IPR011993	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR018247	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR002048	Domain	EF-hand domain	Interproscan
IPR050403	Family	Myosin Regulatory Light Chain	Interproscan
IPR004481	Family	Sodium/potassium/calcium exchanger	Interproscan
IPR044880	Homologous_superfamily	NCX, central ion-binding domain superfamily	Interproscan
IPR004837	Domain	Sodium/calcium exchanger membrane region	Interproscan
IPR004947	Family	Deoxyribonuclease II	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43401	L-THREONINE 3-DEHYDROGENASE	Interproscan
PTHR46481	ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4	Interproscan
PTHR12877	RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR	Interproscan
PTHR23049	MYOSIN REGULATORY LIGHT CHAIN 2	Interproscan
PTHR10846	SODIUM/POTASSIUM/CALCIUM EXCHANGER	Interproscan
PTHR10858	DEOXYRIBONUCLEASE II	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0005085	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0030036	Biological Process	actin cytoskeleton organization	Interproscan
GO:0051496	Biological Process	positive regulation of stress fiber assembly	Interproscan
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005262	Molecular Function	calcium channel activity	Interproscan
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0006874	Biological Process	intracellular calcium ion homeostasis	Interproscan
GO:0008273	Molecular Function	calcium, potassium:sodium antiporter activity	Interproscan
GO:0070588	Biological Process	calcium ion transmembrane transport	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan
GO:0004531	Molecular Function	deoxyribonuclease II activity	Interproscan
GO:0006259	Biological Process	DNA metabolic process	Interproscan
GO:0006309	Biological Process	apoptotic DNA fragmentation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K13754	SLC24A6, NCKX6; solute carrier family 24 (sodium/potassium/calcium exchanger), member 6	-	Cytosolic DNA-sensing pathway	ko04623	deepkoala
			Exosome	ko04147	deepkoala
			Pentose and glucuronate interconversions	ko00040	deepkoala
			Transporters	ko02000	deepkoala