Detailed information of g1318.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: KAJ7330720.1, hypothetical protein OS493_021648 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P55906Transforming growth factor-beta-induced protein ig-h3 OS=Bos taurus OX=9913 GN=TGFBI PE=1 SV=2
O11780Transforming growth factor-beta-induced protein ig-h3 OS=Sus scrofa OX=9823 GN=TGFBI PE=1 SV=1
P82198Transforming growth factor-beta-induced protein ig-h3 OS=Mus musculus OX=10090 GN=Tgfbi PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|SH3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07653SH3_2Variant SH3 domainDomainInterproscan
PF05383LaLa domainDomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF000027tm_27 transmembrane receptor (Secretin family)FamilyInterproscan
PF13976gag_pre-integrsGAG-pre-integrase domainDomainInterproscan
PF07727RVT_2Reverse transcriptase (RNA-dependent DNA polymerase)FamilyInterproscan
PF02469FasciclinFasciclin domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF01079HintHint moduleFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001452DomainSH3 domainInterproscan
IPR003005FamilyAmphiphysinInterproscan
IPR036028Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR006630DomainLa-type HTH domainInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR045180FamilyLa domain containing proteinInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR000832FamilyGPCR, family 2, secretin-likeInterproscan
IPR017981DomainGPCR, family 2-like, 7TMInterproscan
IPR053231FamilyG-protein coupled receptor LN-TM7Interproscan
IPR025724DomainGAG-pre-integrase domainInterproscan
IPR013103DomainReverse transcriptase, RNA-dependent DNA polymeraseInterproscan
IPR000782DomainFAS1 domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR036378Homologous_superfamilyFAS1 domain superfamilyInterproscan
IPR050904FamilyCell adhesion and biosynthesis-related proteinInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR036844Homologous_superfamilyHint domain superfamilyInterproscan
IPR050387FamilyHedgehog SignalingInterproscan
IPR001767DomainHedgehog protein, Hint domainInterproscan
IPR003582DomainShKT domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46514AMPHIPHYSINInterproscan
PTHR22792LUPUS LA PROTEIN-RELATEDInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR45902LATROPHILIN RECEPTOR-LIKE PROTEIN AInterproscan
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR10900PERIOSTIN-RELATEDInterproscan
PTHR11889HEDGEHOGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005543Molecular Functionphospholipid bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003730Molecular FunctionmRNA 3'-UTR bindingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0010494Cellular Componentcytoplasmic stress granuleInterproscan
GO:0045727Biological Processpositive regulation of translationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0004888Molecular Functiontransmembrane signaling receptor activityInterproscan
GO:0007166Biological Processcell surface receptor signaling pathwayInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0030198Biological Processextracellular matrix organizationInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan
GO:0050839Molecular Functioncell adhesion molecule bindingInterproscan
GO:0016540Biological Processprotein autoprocessingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03229yscU, sctU, hrcU, ssaU; type III secretion protein U-Secretion systemko02044deepkoala

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