Gene detail

Detailed information of g1324.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: KAG8561684.1, hypothetical protein GDO81_015439 [Engystomops pustulosus]
Species Calvadosia cruxmelitensis · all data for this species · gene families

Sequence

Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q28653	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform OS=Oryctolagus cuniculus OX=9986 GN=PPP2R5D PE=2 SV=1
Q14738	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform OS=Homo sapiens OX=9606 GN=PPP2R5D PE=1 SV=1
Q13362	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform OS=Homo sapiens OX=9606 GN=PPP2R5C PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000002 (this species only)
Orthogroup (gene family)	OG0000685 (this species only)
Orthogroup (gene family)	OG0001216 (this species only)
Orthogroup (gene family)	OG0001686 (this species only)
Orthogroup (gene family)	OG0001775 (this species only)
Orthogroup (gene family)	OG0001884 (this species only)
Orthogroup (gene family)	OG0003908 (this species only)
Orthogroup (gene family)	OG0004043 (this species only)
Orthogroup (gene family)	OG0004684 (this species only)
Orthogroup (gene family)	OG0027641 (this species only)
Orthogroup (gene family)	OG0040001 (this species only)
Orthogroup (gene family)	OG0173124 (this species only)
Orthogroup (gene family)	OG0173730 (this species only)
Orthogroup (gene family)	OG0174242 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF17921 all species →	Integrase_H2C2	Integrase zinc binding domain	Domain	Interproscan
PF00780 all species →	CNH	CNH domain	Repeat	Interproscan
PF01603 all species →	B56	Protein phosphatase 2A regulatory B subunit (B56 family)	Repeat	Interproscan
PF00248 all species →	Aldo_ket_red	Aldo/keto reductase family	Domain	Interproscan
PF01549 all species →	ShK	ShK domain-like	Domain	Interproscan
PF01400 all species →	Astacin	Astacin (Peptidase family M12A)	Domain	Interproscan
PF00153 all species →	Mito_carr	Mitochondrial carrier protein	Repeat	Interproscan
PF01142 all species →	TruD	tRNA pseudouridine synthase D (TruD)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050951 all species →	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR041588 all species →	Domain	Integrase zinc-binding domain	Interproscan
IPR001180 all species →	Domain	Citron homology (CNH) domain	Interproscan
IPR050285 all species →	Family	STE20 Serine/Threonine-Protein Kinase	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR043502 all species →	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR002554 all species →	Family	Protein phosphatase 2A, regulatory B subunit, B56	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR043128 all species →	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR018170 all species →	Conserved_site	Aldo/keto reductase, conserved site	Interproscan
IPR020471 all species →	Family	Aldo-keto reductase	Interproscan
IPR036812 all species →	Homologous_superfamily	NADP-dependent oxidoreductase domain superfamily	Interproscan
IPR023210 all species →	Domain	NADP-dependent oxidoreductase domain	Interproscan
IPR006026 all species →	Domain	Peptidase, metallopeptidase	Interproscan
IPR024079 all species →	Homologous_superfamily	Metallopeptidase, catalytic domain superfamily	Interproscan
IPR001506 all species →	Domain	Peptidase M12A	Interproscan
IPR003582 all species →	Domain	ShKT domain	Interproscan
IPR034035 all species →	Domain	Astacin-like metallopeptidase domain	Interproscan
IPR018108 all species →	Repeat	Mitochondrial substrate/solute carrier	Interproscan
IPR023395 all species →	Homologous_superfamily	Mitochondrial carrier domain superfamily	Interproscan
IPR049562 all species →	Family	Solute carrier family 25 member 33/36-like	Interproscan
IPR002067 all species →	Family	Mitochondrial carrier protein	Interproscan
IPR001656 all species →	Family	Pseudouridine synthase, TruD	Interproscan
IPR042214 all species →	Homologous_superfamily	Pseudouridine synthase, TruD, catalytic domain	Interproscan
IPR020103 all species →	Homologous_superfamily	Pseudouridine synthase, catalytic domain superfamily	Interproscan
IPR011760 all species →	Domain	Pseudouridine synthase, TruD, insertion domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR37984 all species →	PROTEIN CBG26694	Interproscan
PTHR48015 all species →	SERINE/THREONINE-PROTEIN KINASE TAO	Interproscan
PTHR47331 all species →	PHD-TYPE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR10257 all species →	SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B	Interproscan
PTHR33327 all species →	ENDONUCLEASE	Interproscan
PTHR11732 all species →	ALDO/KETO REDUCTASE	Interproscan
PTHR10127 all species →	DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING	Interproscan
PTHR45829 all species →	MITOCHONDRIAL CARRIER PROTEIN RIM2	Interproscan
PTHR13326 all species →	TRNA PSEUDOURIDINE SYNTHASE D	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0023014 all species →	Biological Process	signal transduction	Interproscan
GO:0035556 all species →	Biological Process	intracellular signal transduction	Interproscan
GO:0043408 all species →	Biological Process	regulation of MAPK cascade	Interproscan
GO:0000159 all species →	Cellular Component	protein phosphatase type 2A complex	Interproscan
GO:0007165 all species →	Biological Process	signal transduction	Interproscan
GO:0019888 all species →	Molecular Function	protein phosphatase regulator activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0006470 all species →	Biological Process	protein dephosphorylation	Interproscan
GO:0072542 all species →	Molecular Function	protein phosphatase activator activity	Interproscan
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan
GO:0004032 all species →	Molecular Function	aldose reductase (NADPH) activity	Interproscan
GO:0004222 all species →	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0006508 all species →	Biological Process	proteolysis	Interproscan
GO:0008237 all species →	Molecular Function	metallopeptidase activity	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0000002 all species →	Biological Process	mitochondrial genome maintenance	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0015218 all species →	Molecular Function	pyrimidine nucleotide transmembrane transporter activity	Interproscan
GO:1990519 all species →	Biological Process	pyrimidine nucleotide import into mitochondrion	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan
GO:0001522 all species →	Biological Process	pseudouridine synthesis	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0009451 all species →	Biological Process	RNA modification	Interproscan
GO:0009982 all species →	Molecular Function	pseudouridine synthase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15116	SLC25A33_36, RIM2; solute carrier family 25, member 33/36	-	Transporters	ko02000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.