Gene detail

Detailed information of g1325.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: XP_027057817.1, protein KTI12 homolog isoform X2 [Pocillopora damicornis]
Species Calvadosia cruxmelitensis · all data for this species · gene families

Sequence

Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q0P457	Protein KTI12 homolog OS=Danio rerio OX=7955 GN=kti12 PE=2 SV=2
Q4KLF3	Protein KTI12 homolog OS=Xenopus laevis OX=8355 GN=kti12 PE=2 SV=1
Q5I0L7	Protein KTI12 homolog OS=Rattus norvegicus OX=10116 GN=Kti12 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000407 (this species only)
Orthogroup (gene family)	OG0000847 (this species only)
Orthogroup (gene family)	OG0001086 (this species only)
Orthogroup (gene family)	OG0002061 (this species only)
Orthogroup (gene family)	OG0002071 (this species only)
Orthogroup (gene family)	OG0002225 (this species only)
Orthogroup (gene family)	OG0003871 (this species only)
Orthogroup (gene family)	OG0004437 (this species only)
Orthogroup (gene family)	OG0005036 (this species only)
Orthogroup (gene family)	OG0005861 (this species only)
Orthogroup (gene family)	OG0005987 (this species only)
Orthogroup (gene family)	OG0007014 (this species only)
Orthogroup (gene family)	OG0012599 (this species only)
Orthogroup (gene family)	OG0048244 (this species only)
Transcription factor family	zf-C2H2 · all TF in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00096 all species →	zf-C2H2	Zinc finger, C2H2 type	Domain	Interproscan
PF14783 all species →	BBS2_Mid	Ciliary BBSome complex subunit 2, middle region	Repeat	Interproscan
PF14782 all species →	BBS2_C	Ciliary BBSome complex subunit 2, C-terminal	Family	Interproscan
PF03096 all species →	Ndr	Ndr family	Domain	Interproscan
PF01163 all species →	RIO1	RIO1 family	Family	Interproscan
PF08433 all species →	KTI12	Chromatin associated protein KTI12	Domain	Interproscan
PF02744 all species →	GalP_UDP_tr_C	Galactose-1-phosphate uridyl transferase, C-terminal domain	Domain	Interproscan
PF15711 all species →	ILEI	Interleukin-like EMT inducer	Domain	Interproscan
PF00005 all species →	ABC_tran	ABC transporter	Domain	Interproscan
PF02535 all species →	Zip	ZIP Zinc transporter	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013087 all species →	Domain	Zinc finger C2H2-type	Interproscan
IPR036236 all species →	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan
IPR016616 all species →	Family	Bardet-Biedl syndrome 2 protein	Interproscan
IPR029429 all species →	Domain	Ciliary BBSome complex subunit 2, middle region	Interproscan
IPR029333 all species →	Domain	Ciliary BBSome complex subunit 2, C-terminal domain	Interproscan
IPR028994 all species →	Homologous_superfamily	Integrin alpha, N-terminal	Interproscan
IPR051858 all species →	Family	WD repeat-containing GAD-1	Interproscan
IPR036322 all species →	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR029058 all species →	Homologous_superfamily	Alpha/Beta hydrolase fold	Interproscan
IPR004142 all species →	Family	NDRG	Interproscan
IPR020846 all species →	Domain	Major facilitator superfamily domain	Interproscan
IPR036259 all species →	Homologous_superfamily	MFS transporter superfamily	Interproscan
IPR043596 all species →	Family	CFAP53/TCHP	Interproscan
IPR000687 all species →	Domain	RIO kinase	Interproscan
IPR030484 all species →	Domain	Serine/threonine-protein kinase Rio2	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR013641 all species →	Family	Protein KTI12/L-seryl-tRNA(Sec) kinase	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR036265 all species →	Homologous_superfamily	HIT-like superfamily	Interproscan
IPR001937 all species →	Family	Galactose-1-phosphate uridyl transferase, class I	Interproscan
IPR005850 all species →	Domain	Galactose-1-phosphate uridyl transferase, C-terminal	Interproscan
IPR039477 all species →	Domain	ILEI/PANDER domain	Interproscan
IPR003439 all species →	Domain	ABC transporter-like, ATP-binding domain	Interproscan
IPR050352 all species →	Family	ATP-binding cassette subfamily G transporters	Interproscan
IPR003689 all species →	Family	Zinc/iron permease	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23235 all species →	KRUEPPEL-LIKE TRANSCRIPTION FACTOR	Interproscan
PTHR32465 all species →	BARDET-BIEDL SYNDROME 2 PROTEIN	Interproscan
PTHR16017 all species →	GASTRULATION DEFECTIVE PROTEIN 1-RELATED	Interproscan
PTHR11034 all species →	N-MYC DOWNSTREAM REGULATED	Interproscan
PTHR31183 all species →	TRICHOPLEIN KERATIN FILAMENT-BINDING PROTEIN FAMILY MEMBER	Interproscan
PTHR45852 all species →	SER/THR-PROTEIN KINASE RIO2	Interproscan
PTHR12435 all species →	UNCHARACTERIZED	Interproscan
PTHR11943 all species →	GALACTOSE-1-PHOSPHATE URIDYLYLTRANSFERASE	Interproscan
PTHR48041 all species →	ABC TRANSPORTER G FAMILY MEMBER 28	Interproscan
PTHR16950 all species →	ZINC TRANSPORTER SLC39A7 HISTIDINE-RICH MEMBRANE PROTEIN KE4	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000978 all species →	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981 all species →	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0031514 all species →	Cellular Component	motile cilium	Interproscan
GO:0034464 all species →	Cellular Component	BBSome	Interproscan
GO:0036064 all species →	Cellular Component	ciliary basal body	Interproscan
GO:0043005 all species →	Cellular Component	neuron projection	Interproscan
GO:0060271 all species →	Biological Process	cilium assembly	Interproscan
GO:1905515 all species →	Biological Process	non-motile cilium assembly	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0035861 all species →	Cellular Component	site of double-strand break	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0007165 all species →	Biological Process	signal transduction	Interproscan
GO:0022857 all species →	Molecular Function	transmembrane transporter activity	Interproscan
GO:0006915 all species →	Biological Process	apoptotic process	Interproscan
GO:0045095 all species →	Cellular Component	keratin filament	Interproscan
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0030490 all species →	Biological Process	maturation of SSU-rRNA	Interproscan
GO:0030688 all species →	Cellular Component	preribosome, small subunit precursor	Interproscan
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0002098 all species →	Biological Process	tRNA wobble uridine modification	Interproscan
GO:0006012 all species →	Biological Process	galactose metabolic process	Interproscan
GO:0008108 all species →	Molecular Function	UDP-glucose:hexose-1-phosphate uridylyltransferase activity	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0033499 all species →	Biological Process	galactose catabolic process via UDP-galactose	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0042626 all species →	Molecular Function	ATPase-coupled transmembrane transporter activity	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan
GO:0005385 all species →	Molecular Function	zinc ion transmembrane transporter activity	Interproscan
GO:0006882 all species →	Biological Process	intracellular zinc ion homeostasis	Interproscan
GO:0071577 all species →	Biological Process	zinc ion transmembrane transport	Interproscan
GO:0030001 all species →	Biological Process	metal ion transport	Interproscan
GO:0046873 all species →	Molecular Function	metal ion transmembrane transporter activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15456	KTI12; protein KTI12	-	Transfer RNA biogenesis	ko03016	deepkoala
K16811	TCHP; trichoplein keratin filament-binding protein	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.