Detailed information of g1328.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: AAD26626.1, brachyury homolog HyBra1, partial [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
O15178T-box transcription factor T OS=Homo sapiens OX=9606 GN=TBXT PE=1 SV=1
Q9GL27T-box transcription factor T OS=Canis lupus familiaris OX=9615 GN=TBXT PE=2 SV=1
P24781T-box transcription factor T OS=Xenopus laevis OX=8355 GN=tbxt PE=1 SV=1
Gene familySubfamily
Transcription Factors FamilyT-box
Ubiquitin FamilyUBD|Other|Beta-prp
Transcription Factors FamilyNCU-G1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF15065NCU-G1Lysosomal transcription factor, NCU-G1FamilyInterproscan
PF00689Cation_ATPase_CCation transporting ATPase, C-terminusFamilyInterproscan
PF08282Hydrolase_3haloacid dehalogenase-like hydrolaseDomainInterproscan
PF04193PQ-loopPQ loop repeat RepeatInterproscan
PF08340DUF1732Domain of unknown function (DUF1732)FamilyInterproscan
PF03755YicC_NYicC-like family, N-terminal region FamilyInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF09111SLIDESLIDEDomainInterproscan
PF09110HANDHANDDomainInterproscan
PF00176SNF2-rel_domSNF2-related domainDomainInterproscan
PF00907T-boxT-boxDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR029382FamilyLysosomal transcription factor, NCU-G1Interproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR011047Homologous_superfamilyQuinoprotein alcohol dehydrogenase-like superfamilyInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR001757FamilyP-type ATPaseInterproscan
IPR023298Homologous_superfamilyP-type ATPase, transmembrane domain superfamilyInterproscan
IPR036412Homologous_superfamilyHAD-like superfamilyInterproscan
IPR006068DomainCation-transporting P-type ATPase, C-terminalInterproscan
IPR006603RepeatPQ-loop repeatInterproscan
IPR052241FamilySolute Carrier Family 66 (SLC66) and Scramblase ANY1Interproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR013551DomainEndoribonuclease YicC-like, C-terminalInterproscan
IPR005229FamilyEndoribonuclease YicC/YloC-likeInterproscan
IPR013527DomainEndoribonuclease YicC-like, N-terminalInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR049730DomainSNF2/RAD5-like, C-terminal helicase domainInterproscan
IPR036306Homologous_superfamilyISWI, HAND domain superfamilyInterproscan
IPR038718Homologous_superfamilySNF2-like, N-terminal domain superfamilyInterproscan
IPR017884DomainSANT domainInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR044754DomainIsw1/2, N-terminalInterproscan
IPR001005DomainSANT/Myb domainInterproscan
IPR015195DomainSLIDE domainInterproscan
IPR015194DomainISWI, HAND domainInterproscan
IPR000330DomainSNF2, N-terminalInterproscan
IPR008967Homologous_superfamilyp53-like transcription factor, DNA-binding domain superfamilyInterproscan
IPR046360DomainT-box transcription factor, DNA-binding domainInterproscan
IPR018186Conserved_siteTranscription factor, T-box, conserved siteInterproscan
IPR001699FamilyT-box transcription factorInterproscan
IPR036960Homologous_superfamilyT-box superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR31981GLYCOSYLATED LYSOSOMAL MEMBRANE PROTEINInterproscan
PTHR45532WD REPEAT-CONTAINING PROTEIN 97Interproscan
PTHR42861CALCIUM-TRANSPORTING ATPASEInterproscan
PTHR14856PQ-LOOP REPEAT-CONTAINING PROTEIN 1-LIKE PROTEINInterproscan
PTHR37162HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATEDInterproscan
PTHR30636UNCHARACTERIZEDInterproscan
PTHR45623CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATEDInterproscan
PTHR11267T-BOX PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005764Cellular ComponentlysosomeInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005215Molecular Functiontransporter activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0005388Molecular FunctionP-type calcium transporter activityInterproscan
GO:0006874Biological Processintracellular calcium ion homeostasisInterproscan
GO:0015662Molecular FunctionP-type ion transporter activityInterproscan
GO:0016021Cellular ComponentmembraneInterproscan
GO:0034220Biological Processmonoatomic ion transmembrane transportInterproscan
GO:0070588Biological Processcalcium ion transmembrane transportInterproscan
GO:0005768Cellular ComponentendosomeInterproscan
GO:0005802Cellular Componenttrans-Golgi networkInterproscan
GO:0042147Biological Processretrograde transport, endosome to GolgiInterproscan
GO:0045332Biological Processphospholipid translocationInterproscan
GO:0004521Molecular FunctionRNA endonuclease activityInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0031491Molecular Functionnucleosome bindingInterproscan
GO:0000785Cellular ComponentchromatinInterproscan
GO:0003682Molecular Functionchromatin bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0034728Biological Processnucleosome organizationInterproscan
GO:0042393Molecular Functionhistone bindingInterproscan
GO:0140658Molecular FunctionATP-dependent chromatin remodeler activityInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0045893Biological Processpositive regulation of DNA-templated transcriptionInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0001707Biological Processmesoderm formationInterproscan
GO:0001708Biological Processcell fate specificationInterproscan
GO:0003007Biological Processheart morphogenesisInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11654SMARCA5, SNF2H, ISWI; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5EC:5.6.2.-
Chromosome and associated proteinsko03036deepkoala

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