Detailed information of g133.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_002158901.3, probable phosphoserine aminotransferase [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P10658Phosphoserine aminotransferase OS=Oryctolagus cuniculus OX=9986 GN=PSAT1 PE=2 SV=1
Q9VAN0Phosphoserine aminotransferase OS=Drosophila melanogaster OX=7227 GN=Psat PE=2 SV=1
Q9Y617Phosphoserine aminotransferase OS=Homo sapiens OX=9606 GN=PSAT1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00266Aminotran_5Aminotransferase class-VDomainInterproscan
PF00076RRM_1RNA recognition motifDomainInterproscan
PF08205C2-set_2CD80-like C2-set immunoglobulin domain DomainInterproscan
PF000017tm_17 transmembrane receptor (rhodopsin family)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015422Homologous_superfamilyPyridoxal phosphate-dependent transferase, small domainInterproscan
IPR022278FamilyPhosphoserine aminotransferaseInterproscan
IPR015424Homologous_superfamilyPyridoxal phosphate-dependent transferaseInterproscan
IPR000192DomainAminotransferase class V domainInterproscan
IPR015421Homologous_superfamilyPyridoxal phosphate-dependent transferase, major domainInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR051183FamilyU1 snRNP 70 kDa and U11/U12 snRNP 35 kDaInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR013162DomainCD80-like, immunoglobulin C2-setInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan
IPR000276FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43247PHOSPHOSERINE AMINOTRANSFERASEInterproscan
PTHR13952U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KDInterproscan
PTHR46104GENE 9195-RELATED-RELATEDInterproscan
PTHR46013VASCULAR CELL ADHESION MOLECULE 1Interproscan
PTHR24246OLFACTORY RECEPTOR AND ADENOSINE RECEPTORInterproscan
PTHR37984PROTEIN CBG26694Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004648Molecular FunctionO-phospho-L-serine:2-oxoglutarate aminotransferase activityInterproscan
GO:0006564Biological ProcessL-serine biosynthetic processInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0030170Molecular Functionpyridoxal phosphate bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005689Cellular ComponentU12-type spliceosomal complexInterproscan
GO:0017069Molecular FunctionsnRNA bindingInterproscan
GO:0071011Cellular Componentprecatalytic spliceosomeInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13155SNRNP35; U11/U12 small nuclear ribonucleoprotein 35 kDa protein-Amino acid related enzymesko01007deepkoala
Spliceosomeko03041deepkoala

TOP