Gene detail

Detailed information of g1331.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: XP_035669492.1, cyclin-dependent kinase-like 2, partial [Branchiostoma floridae]
Species Calvadosia cruxmelitensis · all data for this species · gene families

Sequence

Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5R754	Cyclin-dependent kinase-like 2 OS=Pongo abelii OX=9601 GN=CDKL2 PE=2 SV=1
Q92772	Cyclin-dependent kinase-like 2 OS=Homo sapiens OX=9606 GN=CDKL2 PE=1 SV=1
Q4R7T5	Cyclin-dependent kinase-like 2 OS=Macaca fascicularis OX=9541 GN=CDKL2 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000011 (this species only)
Orthogroup (gene family)	OG0000012 (this species only)
Orthogroup (gene family)	OG0000015 (this species only)
Orthogroup (gene family)	OG0000810 (this species only)
Orthogroup (gene family)	OG0001158 (this species only)
Orthogroup (gene family)	OG0003185 (this species only)
Orthogroup (gene family)	OG0005312 (this species only)
Orthogroup (gene family)	OG0006558 (this species only)
Orthogroup (gene family)	OG0007433 (this species only)
Orthogroup (gene family)	OG0012491 (this species only)
Orthogroup (gene family)	OG0020119 (this species only)
Orthogroup (gene family)	OG0172008 (this species only)
Orthogroup (gene family)	OG0173985 (this species only)
Orthogroup (gene family)	OG0174294 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07690 all species →	MFS_1	Major Facilitator Superfamily	Family	Interproscan
PF17963 all species →	Big_9	Bacterial Ig domain	Domain	Interproscan
PF00078 all species →	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan
PF13637 all species →	Ank_4	Ankyrin repeats (many copies)	Repeat	Interproscan
PF00567 all species →	TUDOR	Tudor domain	Domain	Interproscan
PF00565 all species →	SNase	Staphylococcal nuclease homologue	Domain	Interproscan
PF02889 all species →	Sec63	Sec63 Brl domain	Family	Interproscan
PF00043 all species →	GST_C	Glutathione S-transferase, C-terminal domain	Domain	Interproscan
PF13417 all species →	GST_N_3	Glutathione S-transferase, N-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR020846 all species →	Domain	Major facilitator superfamily domain	Interproscan
IPR011701 all species →	Family	Major facilitator superfamily	Interproscan
IPR036259 all species →	Homologous_superfamily	MFS transporter superfamily	Interproscan
IPR005829 all species →	Conserved_site	Sugar transporter, conserved site	Interproscan
IPR035986 all species →	Homologous_superfamily	PKD domain superfamily	Interproscan
IPR022409 all species →	Domain	PKD/Chitinase domain	Interproscan
IPR029865 all species →	Family	Dyslexia-associated protein KIAA0319-like	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR000477 all species →	Domain	Reverse transcriptase domain	Interproscan
IPR043502 all species →	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR050108 all species →	Family	Cyclin-dependent kinase	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR008271 all species →	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR011992 all species →	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR039656 all species →	Family	Synergin gamma	Interproscan
IPR000261 all species →	Domain	EH domain	Interproscan
IPR036770 all species →	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR002110 all species →	Repeat	Ankyrin repeat	Interproscan
IPR035437 all species →	Homologous_superfamily	SNase-like, OB-fold superfamily	Interproscan
IPR047386 all species →	Domain	Tudor domain-containing protein 11, Tudor domain	Interproscan
IPR002999 all species →	Domain	Tudor domain	Interproscan
IPR016071 all species →	Domain	Staphylococcal nuclease (SNase-like), OB-fold	Interproscan
IPR004179 all species →	Domain	Sec63 domain	Interproscan
IPR036249 all species →	Homologous_superfamily	Thioredoxin-like superfamily	Interproscan
IPR010987 all species →	Domain	Glutathione S-transferase, C-terminal-like	Interproscan
IPR004045 all species →	Domain	Glutathione S-transferase, N-terminal	Interproscan
IPR004046 all species →	Domain	Glutathione S-transferase, C-terminal	Interproscan
IPR036282 all species →	Homologous_superfamily	Glutathione S-transferase, C-terminal domain superfamily	Interproscan
IPR040079 all species →	Family	Glutathione transferase family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23511 all species →	SYNAPTIC VESICLE GLYCOPROTEIN 2	Interproscan
PTHR46182 all species →	FI19480P1	Interproscan
PTHR19446 all species →	REVERSE TRANSCRIPTASES	Interproscan
PTHR24056 all species →	CELL DIVISION PROTEIN KINASE	Interproscan
PTHR15463 all species →	AP1 GAMMA SUBUNIT BINDING PROTEIN 1	Interproscan
PTHR12302 all species →	EBNA2 BINDING PROTEIN P100	Interproscan
PTHR24075 all species →	SEC63 DOMAIN-CONTAINING	Interproscan
PTHR43969 all species →	GLUTATHIONE S TRANSFERASE D10, ISOFORM A-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0022857 all species →	Molecular Function	transmembrane transporter activity	Interproscan
GO:0016021 all species →	Cellular Component	membrane	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0001764 all species →	Biological Process	neuron migration	Interproscan
GO:0031410 all species →	Cellular Component	cytoplasmic vesicle	Interproscan
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0030130 all species →	Cellular Component	clathrin coat of trans-Golgi network vesicle	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0004518 all species →	Molecular Function	nuclease activity	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0006402 all species →	Biological Process	mRNA catabolic process	Interproscan
GO:0043138 all species →	Molecular Function	3'-5' DNA helicase activity	Interproscan
GO:0004364 all species →	Molecular Function	glutathione transferase activity	Interproscan
GO:0006749 all species →	Biological Process	glutathione metabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00799	GST, gst; glutathione S-transferase	EC:2.5.1.18	Transporters	ko02000	deepkoala
K08824	CDKL; cyclin-dependent kinase-like	EC:2.7.11.22	Protein kinases	ko01001	deepkoala
K24404	KIAA0319L; dyslexia-associated protein KIAA0319-like protein	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.