Gene detail

Detailed information of g1336.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: CAH3032580.1, unnamed protein product [Porites lobata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
P0DMQ6	Sorbitol dehydrogenase OS=Gallus gallus OX=9031 GN=SORD PE=1 SV=1
Q4R639	Sorbitol dehydrogenase OS=Macaca fascicularis OX=9541 GN=SORD PE=2 SV=3
Q64442	Sorbitol dehydrogenase OS=Mus musculus OX=10090 GN=Sord PE=1 SV=3

Gene family	Subfamily
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|CDC20
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|DWD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13191	AAA_16	AAA ATPase domain	Domain	Interproscan
PF13424	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan
PF13374	TPR_10	Tetratricopeptide repeat	Repeat	Interproscan
PF00248	Aldo_ket_red	Aldo/keto reductase family	Domain	Interproscan
PF00107	ADH_zinc_N	Zinc-binding dehydrogenase	Domain	Interproscan
PF08240	ADH_N	Alcohol dehydrogenase GroES-like domain	Domain	Interproscan
PF07002	Copine	Copine	Family	Interproscan
PF00400	WD40	WD domain, G-beta repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011029	Homologous_superfamily	Death-like domain superfamily	Interproscan
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR003593	Domain	AAA+ ATPase domain	Interproscan
IPR051787	Family	Effector and Ciliary Development-Associated Protein	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR041664	Domain	Orc1-like, AAA ATPase domain	Interproscan
IPR000488	Domain	Death domain	Interproscan
IPR035992	Homologous_superfamily	Ricin B-like lectins	Interproscan
IPR050523	Family	Aldo/Keto Reductase Detoxification and Biosynthesis	Interproscan
IPR023210	Domain	NADP-dependent oxidoreductase domain	Interproscan
IPR036812	Homologous_superfamily	NADP-dependent oxidoreductase domain superfamily	Interproscan
IPR020471	Family	Aldo-keto reductase	Interproscan
IPR011032	Homologous_superfamily	GroES-like superfamily	Interproscan
IPR036291	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR002328	Conserved_site	Alcohol dehydrogenase, zinc-type, conserved site	Interproscan
IPR020843	Domain	Polyketide synthase, enoylreductase domain	Interproscan
IPR013149	Domain	Alcohol dehydrogenase-like, C-terminal	Interproscan
IPR013154	Domain	Alcohol dehydrogenase-like, N-terminal	Interproscan
IPR045306	Family	Sorbitol dehydrogenase-like	Interproscan
IPR010734	Domain	Copine, C-terminal	Interproscan
IPR045052	Family	Copine	Interproscan
IPR036465	Homologous_superfamily	von Willebrand factor A-like domain superfamily	Interproscan
IPR002035	Domain	von Willebrand factor, type A	Interproscan
IPR001680	Repeat	WD40 repeat	Interproscan
IPR019775	Conserved_site	WD40 repeat, conserved site	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR020472	Repeat	G-protein beta WD-40 repeat	Interproscan
IPR051980	Family	WD repeat domain-containing protein MORG1	Interproscan
IPR029063	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR042086	Homologous_superfamily	Methyltransferase, alpha-helical capping domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45641	TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870)	Interproscan
PTHR33395	TRANSCRIPTASE, PUTATIVE-RELATED-RELATED	Interproscan
PTHR43364	NADH-SPECIFIC METHYLGLYOXAL REDUCTASE-RELATED	Interproscan
PTHR43161	SORBITOL DEHYDROGENASE	Interproscan
PTHR10857	COPINE	Interproscan
PTHR22842	WD40 REPEAT PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan
GO:0007508	Biological Process	larval heart development	Interproscan
GO:0031012	Cellular Component	extracellular matrix	Interproscan
GO:0061343	Biological Process	cell adhesion involved in heart morphogenesis	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0003939	Molecular Function	L-iditol 2-dehydrogenase (NAD+) activity	Interproscan
GO:0006062	Biological Process	sorbitol catabolic process	Interproscan
GO:0016616	Molecular Function	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	Interproscan
GO:0005544	Molecular Function	calcium-dependent phospholipid binding	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0071277	Biological Process	cellular response to calcium ion	Interproscan
GO:0000398	Biological Process	mRNA splicing, via spliceosome	Interproscan
GO:0071013	Cellular Component	catalytic step 2 spliceosome	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K24523	CPNE5_8_9; copine 5/8/9	-	Fructose and mannose metabolism	ko00051	deepkoala
			Spliceosome	ko03041	deepkoala
			Metabolism of xenobiotics by cytochrome P450	ko00980	deepkoala
			Domain-containing proteins not elsewhere classified	ko04990	deepkoala