Gene detail

Detailed information of g13373.t1.1 in Haliclystus octoradiatus

Genomic Location: :...
NR annotation: XP_022779841.1, translation initiation factor eIF-2B subunit epsilon-like isoform X1 [Stylophora pistillata]

Gene Structure

More details in Jbrowse

Sequence

CDS

g13373.t1

ATGGCTTCAAAGAAGAAAGGTGGGAACTCATCAAGCTGGGAGAAAGAAGAAGGAACTGTACAAGCTATCATTGTTGCTGATAGTTTCAATCAAAAATTTGTTCCCATTACAAAAGAGATTCCTCGAACATTGCTTCCTGTCGTCAATTATGTTCTTCTCGATTACACaattgaatatttgttggATCAAGGTGTACAAGACATCATAGTATTTTGCTGTGCCCATGCTGAAAAAGTTAGAAGTCACATCAAATCGTCATGGTCAGCAGTGCCTGCCAGCAGCTCAATTCAAATTGTTATGTCATCATCTGATGATTGCATTTCACTTGGAGATGCTCTCAGAGAAATAGACCGGGAGGGACTTATCAGAACAGACTTCATTCTTGTTCCTGGGGACCTCATAGCAACTGTAAATTTGAAAGCAGCTATTCAAGAACACAGATTAAAACGTAAAAAGGAAAAGACTTTGGTTATGACTATTTTATACAAAACAATGGACCCTGGTCACTTTTCAAGGTCTCGAGAAGAGGATCAATTAATAGCTATAGATCCAAGCACTAAACGTTTACTTCATTTTGAGAATTTACAACAATCTAGTAAATCATCGATACCAATGaatttatttGATGGTAGAAGTTCTGTGCAGCTACGATATGACCTCAGTGATTGTCATATTGCAATTTGTTCGCCTGTGGTACCGCCATTGTTTACagataattttgattatcagACAAAACATGATTTTATCAGGGGAATTCTAATAAATGAAGAGATTCTTGGCAATCAAATATACTGTGAAGTAATCGACAGAGGATACTCTTGTCAAGTATCagatttacaattatataatGCAGTTAGTATAGATATAATGAATAGATGGACGTACCCGCAAGTACCTGATAGTCGATCATATCAATACCTACGTCATAATGTGTATCAAGAAAATAATGTGGTCTTGGCAAGAGATTGTGATCTACAGCAAAATGTTGTGATTggtaaaaatagtaaaatcgGAACTGGAACTTCTGTTTTGAAAAGTGTGATTGGAAATGGATGCACTATAGGAAATAATGTAATTTTAAAGAACGCTTTTCTATGGGACAATGTTGTAATTGAAGATAATTGTACAATTGAGCAAACACTACTCTGCAGTGGATGTCATGTTTTTAGGAATGTTTCACTGCAAGATTGTGTTGCAGCTTATAATGTCAAAATAGGACCAGATGTTGATTTGAATAGAATAAAACTCACATCAACTGATATAACAGAAGAAGAAGATTCTTTTGGGGATGAAACTGACTCTGGTGTCAACGAATCAGATAAAGaAGTTTGCCTTGGTGATAATAGTAATTGTTTCGTGTACAAAGAATGTCACTATGACGATGACAATGGTTTTGTGCCATCTCTATCAGGTTTATACATTGATGGTTACGgcaatgaaaatgatgatagcAGTGATGAATCTGTTATATCAGATGCAGAATCAATACAAGCGGAACCAGCCAATGTTTTCTATGGTGAAGTGCTAGAAAATGTTCGCCATGGCTTGGCTGATAATATCGCAATCGACAATATCATTTTGGAGGTCAATGCCTCAAAATACAAACACAACGTAACAATTAcagaaatcaatcaatcaattgttaaatCAATTGTTGAGGTTGTTGTCTGTGATTTATCATTGAATCAACAAGAAATGCTAAAAGAACTCAATAAGgtTACAATGCGACTTTTACCGCTTCTTACAAATTATATCAAGGGAAACGAATCACAACTAGATGCATTGATTGCTGCGGagGATTTCTTTGCTTTAAATATGGAATATGCTTCATTAATGGCAACATTTCTTCATAAACTCTATGAAGAAGACATTCTTGAAGAGGCTGTGATTCTGAAATGGTTTAATGAAGAACCACAGATGGAAGGTCTGCCAAACGCACATTCTTATTCACTCTTGAGAAAAAATCAGACATTACAAAAGTTTATATCATGGCTAGAGGAAGCTGAAGAGGAATCAGatgattaa

Transcript

g13373.t1

Protein

Uniprot

Uniprot term	Description
P47823	Translation initiation factor eIF2B subunit epsilon OS=Oryctolagus cuniculus OX=9986 GN=EIF2B5 PE=1 SV=1
Q64350	Translation initiation factor eIF2B subunit epsilon OS=Rattus norvegicus OX=10116 GN=Eif2b5 PE=1 SV=2
Q8CHW4	Translation initiation factor eIF2B subunit epsilon OS=Mus musculus OX=10090 GN=Eif2b5 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02020	W2	eIF4-gamma/eIF5/eIF2-epsilon	Repeat	Interproscan
PF00483	NTP_transferase	Nucleotidyl transferase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR044123	Domain	Translation initiation factor eIF-2B subunit epsilon, W2 domain	Interproscan
IPR003307	Domain	W2 domain	Interproscan
IPR029044	Homologous_superfamily	Nucleotide-diphospho-sugar transferases	Interproscan
IPR005835	Domain	Nucleotidyl transferase domain	Interproscan
IPR051956	Family	eIF2B Complex Subunit Epsilon	Interproscan
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR035543	Domain	Translation initiation factor eIF-2B subunit epsilon, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45887	TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005085	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0031369	Molecular Function	translation initiation factor binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0009058	Biological Process	biosynthetic process	Interproscan
GO:0003743	Molecular Function	translation initiation factor activity	Interproscan
GO:0005851	Cellular Component	eukaryotic translation initiation factor 2B complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K03240	EIF2B5; translation initiation factor eIF-2B subunit epsilon	-	Translation factors	ko03012	deepkoala