Detailed information of g1343.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_004208599.2, trace amine-associated receptor 8c [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q01727Melanocyte-stimulating hormone receptor OS=Mus musculus OX=10090 GN=Mc1r PE=2 SV=2
P47747Histamine H2 receptor OS=Cavia porcellus OX=10141 GN=HRH2 PE=3 SV=1
Q4R1I4Melanopsin OS=Branchiostoma belcheri OX=7741 GN=OPN4 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00854PTR2POT familyFamilyInterproscan
PF000017tm_17 transmembrane receptor (rhodopsin family)FamilyInterproscan
PF21355TRAF-mep_MATHTRAF/meprin, MATH domainDomainInterproscan
PF00013KH_1KH domainDomainInterproscan
PF00567TUDORTudor domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF000027tm_27 transmembrane receptor (Secretin family)FamilyInterproscan
PF00229TNFTNF(Tumour Necrosis Factor) family DomainInterproscan
PF07651ANTHANTH domainRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036259Homologous_superfamilyMFS transporter superfamilyInterproscan
IPR018456Conserved_sitePTR2 family proton/oligopeptide symporter, conserved siteInterproscan
IPR000109FamilyProton-dependent oligopeptide transporter familyInterproscan
IPR003609DomainPAN/Apple domainInterproscan
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan
IPR000276FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR050569FamilyTrace Amine-Associated ReceptorInterproscan
IPR050125FamilyG-protein coupled receptor opsinsInterproscan
IPR002083DomainMATH/TRAF domainInterproscan
IPR049342DomainTRAF1-6/MEP1A/B-like, MATH domainInterproscan
IPR008974Homologous_superfamilyTRAF-likeInterproscan
IPR035437Homologous_superfamilySNase-like, OB-fold superfamilyInterproscan
IPR036612Homologous_superfamilyK Homology domain, type 1 superfamilyInterproscan
IPR002999DomainTudor domainInterproscan
IPR004087DomainK Homology domainInterproscan
IPR050621FamilyTudor domain-containingInterproscan
IPR004088DomainK Homology domain, type 1Interproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR000832FamilyGPCR, family 2, secretin-likeInterproscan
IPR036055Homologous_superfamilyLDL receptor-like superfamilyInterproscan
IPR017981DomainGPCR, family 2-like, 7TMInterproscan
IPR002172RepeatLow-density lipoprotein (LDL) receptor class A repeatInterproscan
IPR050332FamilyG-protein coupled receptor 2Interproscan
IPR006052DomainTumour necrosis factor domainInterproscan
IPR008983Homologous_superfamilyTumour necrosis factor-like domain superfamilyInterproscan
IPR021184Conserved_siteTumour necrosis factor, conserved siteInterproscan
IPR008942Homologous_superfamilyENTH/VHSInterproscan
IPR011417DomainAP180 N-terminal homology (ANTH) domainInterproscan
IPR013809DomainENTH domainInterproscan
IPR045192FamilyClathrin coat assembly protein AP180-likeInterproscan
IPR014712Homologous_superfamilyANTH domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11654OLIGOPEPTIDE TRANSPORTER-RELATEDInterproscan
PTHR24249HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTORInterproscan
PTHR24240OPSINInterproscan
PTHR22948TUDOR DOMAIN CONTAINING PROTEINInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR45620PDF RECEPTOR-LIKE PROTEIN-RELATEDInterproscan
PTHR11471TUMOR NECROSIS FACTOR FAMILY MEMBERInterproscan
PTHR22951CLATHRIN ASSEMBLY PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0006857Biological Processoligopeptide transportInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0001750Cellular Componentphotoreceptor outer segmentInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007602Biological ProcessphototransductionInterproscan
GO:0008020Molecular FunctionG protein-coupled photoreceptor activityInterproscan
GO:0071482Biological Processcellular response to light stimulusInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0004888Molecular Functiontransmembrane signaling receptor activityInterproscan
GO:0007166Biological Processcell surface receptor signaling pathwayInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007188Biological Processadenylate cyclase-modulating G protein-coupled receptor signaling pathwayInterproscan
GO:0008528Molecular FunctionG protein-coupled peptide receptor activityInterproscan
GO:0005164Molecular Functiontumor necrosis factor receptor bindingInterproscan
GO:0006955Biological Processimmune responseInterproscan
GO:0005543Molecular Functionphospholipid bindingInterproscan
GO:0000149Molecular FunctionSNARE bindingInterproscan
GO:0005545Molecular Function1-phosphatidylinositol bindingInterproscan
GO:0005546Molecular Functionphosphatidylinositol-4,5-bisphosphate bindingInterproscan
GO:0005905Cellular Componentclathrin-coated pitInterproscan
GO:0006900Biological Processvesicle budding from membraneInterproscan
GO:0008021Cellular Componentsynaptic vesicleInterproscan
GO:0016185Biological Processsynaptic vesicle budding from presynaptic endocytic zone membraneInterproscan
GO:0030136Cellular Componentclathrin-coated vesicleInterproscan
GO:0032050Molecular Functionclathrin heavy chain bindingInterproscan
GO:0048268Biological Processclathrin coat assemblyInterproscan
GO:0072583Biological Processclathrin-dependent endocytosisInterproscan
GO:0098894Cellular Componentextrinsic component of presynaptic endocytic zone membraneInterproscan
GO:0030276Molecular Functionclathrin bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K18406TDRKH, TDRD2; tudor domain-containing protein 2-Membrane traffickingko04131deepkoala
G protein-coupled receptorsko04030deepkoala
Chromosome and associated proteinsko03036deepkoala

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