Detailed information of g1344.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: KAJ7333541.1, ATP-binding cassette sub- D member 2 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
F1RBC8ATP-binding cassette sub-family D member 1 OS=Danio rerio OX=7955 GN=abcd1 PE=2 SV=1
Q9UBJ2ATP-binding cassette sub-family D member 2 OS=Homo sapiens OX=9606 GN=ABCD2 PE=1 SV=1
Q9QY44ATP-binding cassette sub-family D member 2 OS=Rattus norvegicus OX=10116 GN=Abcd2 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01176eIF-1aTranslation initiation factor 1A / IF-1DomainInterproscan
PF00005ABC_tranABC transporterDomainInterproscan
PF06472ABC_membrane_2ABC transporter transmembrane region 2FamilyInterproscan
PF01764Lipase_3Lipase (class 3)FamilyInterproscan
PF06524NOA36NOA36 proteinFamilyInterproscan
PF03184DDE_1DDE superfamily endonucleaseFamilyInterproscan
PF04218CENP-B_NCENP-B N-terminal DNA-binding domainDomainInterproscan
PF03221HTH_Tnp_Tc5Tc5 transposase DNA-binding domainDomainInterproscan
PF00583Acetyltransf_1Acetyltransferase (GNAT) familyFamilyInterproscan
PF00229TNFTNF(Tumour Necrosis Factor) family DomainInterproscan
PF00754F5_F8_type_CF5/8 type C domainDomainInterproscan
PF00071RasRas familyDomainInterproscan
PF01902Diphthami_syn_2Diphthamide synthaseFamilyInterproscan
PF01042Ribonuc_L-PSPEndoribonuclease L-PSPDomainInterproscan
PF01927Mut7-CMut7-C RNAse domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006196DomainRNA-binding domain, S1, IF1 typeInterproscan
IPR001253FamilyTranslation initiation factor 1A (eIF-1A)Interproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR036640Homologous_superfamilyABC transporter type 1, transmembrane domain superfamilyInterproscan
IPR003439DomainABC transporter-like, ATP-binding domainInterproscan
IPR050835FamilyATP-binding cassette sub-family DInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR011527DomainABC transporter type 1, transmembrane domainInterproscan
IPR029058Homologous_superfamilyAlpha/Beta hydrolase foldInterproscan
IPR002921DomainFungal lipase-like domainInterproscan
IPR052214FamilyDiacylglycerol Lipase-RelatedInterproscan
IPR010531FamilyZinc finger protein NOA36Interproscan
IPR050863FamilyCentromere and Transposable Element-Derived ProteinInterproscan
IPR004875DomainDDE superfamily endonuclease domainInterproscan
IPR006600DomainHTH CenpB-type DNA-binding domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR007889DomainDNA binding HTH domain, Psq-typeInterproscan
IPR000182DomainGNAT domainInterproscan
IPR051646FamilyN-terminal NatB acetyltransferase catalytic subunitInterproscan
IPR016181Homologous_superfamilyAcyl-CoA N-acyltransferaseInterproscan
IPR008983Homologous_superfamilyTumour necrosis factor-like domain superfamilyInterproscan
IPR006052DomainTumour necrosis factor domainInterproscan
IPR021184Conserved_siteTumour necrosis factor, conserved siteInterproscan
IPR006585DomainFucolectin tachylectin-4 pentraxin-1Interproscan
IPR051941FamilyBlood Group Antigen-Binding LectinInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR000421DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR005225DomainSmall GTP-binding protein domainInterproscan
IPR001806FamilySmall GTPaseInterproscan
IPR050209FamilyRab GTPases family involved in membrane traffickingInterproscan
IPR035959Homologous_superfamilyRutC-like superfamilyInterproscan
IPR002761DomainDiphthamide synthase domainInterproscan
IPR030662FamilyDiphthine--ammonia ligase/Uncharacterised protein MJ0570Interproscan
IPR006175FamilyYjgF/YER057c/UK114 familyInterproscan
IPR002782DomainMut7-C RNAse domainInterproscan
IPR052408FamilyExonuclease MUT-7-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21668EIF-1AInterproscan
PTHR11384ATP-BINDING CASSETTE, SUB-FAMILY D MEMBERInterproscan
PTHR45792DIACYLGLYCEROL LIPASE HOMOLOG-RELATEDInterproscan
PTHR13214ZINC FINGER PROTEIN 330Interproscan
PTHR19303TRANSPOSONInterproscan
PTHR45910N-ALPHA-ACETYLTRANSFERASE 20Interproscan
PTHR11471TUMOR NECROSIS FACTOR FAMILY MEMBERInterproscan
PTHR45713FTP DOMAIN-CONTAINING PROTEINInterproscan
PTHR47979DRAB11-RELATEDInterproscan
PTHR12196DOMAIN OF UNKNOWN FUNCTION 71 DUF71 -CONTAINING PROTEINInterproscan
PTHR477653'-5' EXONUCLEASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003743Molecular Functiontranslation initiation factor activityInterproscan
GO:0006413Biological Processtranslational initiationInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0005324Molecular Functionlong-chain fatty acid transmembrane transporter activityInterproscan
GO:0005778Cellular Componentperoxisomal membraneInterproscan
GO:0006635Biological Processfatty acid beta-oxidationInterproscan
GO:0007031Biological Processperoxisome organizationInterproscan
GO:0015910Biological Processlong-chain fatty acid import into peroxisomeInterproscan
GO:0042626Molecular FunctionATPase-coupled transmembrane transporter activityInterproscan
GO:0042760Biological Processvery long-chain fatty acid catabolic processInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0140359Molecular FunctionABC-type transporter activityInterproscan
GO:0006629Biological Processlipid metabolic processInterproscan
GO:0016042Biological Processlipid catabolic processInterproscan
GO:0016298Molecular Functionlipase activityInterproscan
GO:0019369Biological Processarachidonate metabolic processInterproscan
GO:0046340Biological Processdiacylglycerol catabolic processInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0016747Molecular Functionacyltransferase activity, transferring groups other than amino-acyl groupsInterproscan
GO:0004596Molecular Functionpeptide alpha-N-acetyltransferase activityInterproscan
GO:0017196Biological ProcessN-terminal peptidyl-methionine acetylationInterproscan
GO:0031416Cellular ComponentNatB complexInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005164Molecular Functiontumor necrosis factor receptor bindingInterproscan
GO:0006955Biological Processimmune responseInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005768Cellular ComponentendosomeInterproscan
GO:0005794Cellular ComponentGolgi apparatusInterproscan
GO:0006887Biological ProcessexocytosisInterproscan
GO:0016192Biological Processvesicle-mediated transportInterproscan
GO:0055037Cellular Componentrecycling endosomeInterproscan
GO:0017178Molecular Functiondiphthine-ammonia ligase activityInterproscan
GO:0017183Biological Processprotein histidyl modification to diphthamideInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03236EIF1A; translation initiation factor 1A-Transportersko02000deepkoala
Phototransduction - flyko04745deepkoala
Translation factorsko03012deepkoala

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