Detailed information of g1349.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_028402888.1, nesprin-1-like [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q94K73Phenylalanine--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g58140 PE=1 SV=1
Q99M01Phenylalanine--tRNA ligase, mitochondrial OS=Mus musculus OX=10090 GN=Fars2 PE=1 SV=1
O95363Phenylalanine--tRNA ligase, mitochondrial OS=Homo sapiens OX=9606 GN=FARS2 PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyE2|UBC|UBC
Ubiquitin FamilyUBD|Alpha-Helix|UBA
Ubiquitin FamilyUBD|UBC-like|UBC

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02104SURF1SURF1 familyFamilyInterproscan
PF01409tRNA-synt_2dtRNA synthetases class II core domain (F)DomainInterproscan
PF03147FDX-ACBFerredoxin-fold anticodon binding domainDomainInterproscan
PF00793DAHP_synth_1DAHP synthetase I familyDomainInterproscan
PF000017tm_17 transmembrane receptor (rhodopsin family)FamilyInterproscan
PF00627UBAUBA/TS-N domainDomainInterproscan
PF01607CBM_14Chitin binding Peritrophin-A domainDomainInterproscan
PF00188CAPCysteine-rich secretory protein familyDomainInterproscan
PF00789UBXUBX domainDomainInterproscan
PF00179UQ_conUbiquitin-conjugating enzymeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002994FamilySurfeit locus 1/Shy1Interproscan
IPR045214FamilySurfeit locus 1/4Interproscan
IPR045864Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR005121DomainFerrodoxin-fold anticodon-binding domainInterproscan
IPR002319DomainPhenylalanyl-tRNA synthetaseInterproscan
IPR036690Homologous_superfamilyFerrodoxin-fold anticodon-binding domain superfamilyInterproscan
IPR004530FamilyPhenylalanyl-tRNA synthetase, class IIc, mitochondrialInterproscan
IPR006218DomainDAHP synthetase I/KDSAInterproscan
IPR006269Family3-deoxy-8-phosphooctulonate synthaseInterproscan
IPR013785Homologous_superfamilyAldolase-type TIM barrelInterproscan
IPR000276FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR050125FamilyG-protein coupled receptor opsinsInterproscan
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan
IPR009060Homologous_superfamilyUBA-like superfamilyInterproscan
IPR015940DomainUbiquitin-associated domainInterproscan
IPR002557DomainChitin binding domainInterproscan
IPR036508Homologous_superfamilyChitin binding domain superfamilyInterproscan
IPR052740FamilyCarbohydrate Esterase 4Interproscan
IPR011330Homologous_superfamilyGlycoside hydrolase/deacetylase, beta/alpha-barrelInterproscan
IPR014044DomainCAP domainInterproscan
IPR035940Homologous_superfamilyCAP superfamilyInterproscan
IPR018244Conserved_siteAllergen V5/Tpx-1-related, conserved siteInterproscan
IPR034113DomainGolgi-associated plant pathogenesis-related protein 1, SCP domainInterproscan
IPR001283FamilyCysteine-rich secretory protein-relatedInterproscan
IPR001012DomainUBX domainInterproscan
IPR000608DomainUbiquitin-conjugating enzyme E2Interproscan
IPR016135Homologous_superfamilyUbiquitin-conjugating enzyme/RWD-likeInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23427SURFEIT LOCUS PROTEINInterproscan
PTHR11538PHENYLALANYL-TRNA SYNTHETASEInterproscan
PTHR21057PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASEInterproscan
PTHR24240OPSINInterproscan
PTHR45985-Interproscan
PTHR10334CYSTEINE-RICH SECRETORY PROTEIN-RELATEDInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0033617Biological Processmitochondrial cytochrome c oxidase assemblyInterproscan
GO:0000049Molecular FunctiontRNA bindingInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0043039Biological ProcesstRNA aminoacylationInterproscan
GO:0004826Molecular Functionphenylalanine-tRNA ligase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006432Biological Processphenylalanyl-tRNA aminoacylationInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0009058Biological Processbiosynthetic processInterproscan
GO:0008676Molecular Function3-deoxy-8-phosphooctulonate synthase activityInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0019294Biological Processketo-3-deoxy-D-manno-octulosonic acid biosynthetic processInterproscan
GO:0046364Biological Processmonosaccharide biosynthetic processInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007602Biological ProcessphototransductionInterproscan
GO:0008020Molecular FunctionG protein-coupled photoreceptor activityInterproscan
GO:0071482Biological Processcellular response to light stimulusInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0008061Molecular Functionchitin bindingInterproscan
GO:0005975Biological Processcarbohydrate metabolic processInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10582UBE2Q; ubiquitin-conjugating enzyme E2 QEC:2.3.2.23
Lipopolysaccharide biosynthesis proteinsko01005deepkoala
Ubiquitin systemko04121deepkoala

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