Gene detail

Detailed information of g13524.t1 in Montipora capitata

Genomic Location: Sc0000466:198360...206101
NR annotation: XP_029198911.2, programmed cell death protein 2-like isoform X1 [Acropora millepora]
Species Montipora capitata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5ZID2	Programmed cell death protein 2-like OS=Gallus gallus OX=9031 GN=PDCD2L PE=2 SV=1
Q9BRP1	Programmed cell death protein 2-like OS=Homo sapiens OX=9606 GN=PDCD2L PE=1 SV=1
Q8C5N5	Programmed cell death protein 2-like OS=Mus musculus OX=10090 GN=Pdcd2l PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004891 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04194 all species →	PDCD2_C	Programmed cell death protein 2, C-terminal putative domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007320 all species →	Domain	Programmed cell death protein 2, C-terminal	Interproscan
IPR052815 all species →	Family	Programmed cell death 2-like regulator	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46421 all species →	PROGRAMMED CELL DEATH PROTEIN 2-LIKE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006915 all species →	Biological Process	apoptotic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K14801	TSR4; pre-rRNA-processing protein TSR4	-	Ribosome biogenesis	ko03009	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.