Detailed information of g1356.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: GFU30528.1, sarcosine dehydrogenase, mitochondrial [Trichonephila clavipes]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q64380Sarcosine dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Sardh PE=1 SV=2
Q9UL12Sarcosine dehydrogenase, mitochondrial OS=Homo sapiens OX=9606 GN=SARDH PE=1 SV=1
Q99LB7Sarcosine dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Sardh PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01565FAD_binding_4FAD binding domain DomainInterproscan
PF01266DAOFAD dependent oxidoreductaseDomainInterproscan
PF00878CIMRCation-independent mannose-6-phosphate receptor repeatFamilyInterproscan
PF09588YqaJYqaJ-like viral recombinase domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00619CARDCaspase recruitment domainDomainInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF08502LeuA_dimerLeuA allosteric (dimerisation) domainDomainInterproscan
PF00682HMGL-likeHMGL-likeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036318Homologous_superfamilyFAD-binding, type PCMH-like superfamilyInterproscan
IPR036188Homologous_superfamilyFAD/NAD(P)-binding domain superfamilyInterproscan
IPR016167Homologous_superfamilyFAD-binding, type PCMH, subdomain 1Interproscan
IPR016166DomainFAD-binding domain, PCMH-typeInterproscan
IPR006094DomainFAD linked oxidase, N-terminalInterproscan
IPR016169Homologous_superfamilyFAD-binding, type PCMH, subdomain 2Interproscan
IPR050416FamilyFAD-linked Oxidoreductases in Biosynthetic PathwaysInterproscan
IPR006076DomainFAD dependent oxidoreductaseInterproscan
IPR009011Homologous_superfamilyMannose-6-phosphate receptor binding domain superfamilyInterproscan
IPR044865DomainMRH domainInterproscan
IPR000479RepeatCation-independent mannose-6-phosphate receptor repeatInterproscan
IPR019080DomainYqaJ viral recombinaseInterproscan
IPR011604Homologous_superfamilyPD-(D/E)XK endonuclease-like domain superfamilyInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036373Homologous_superfamilyLarge ribosomal subunit protein bL17 superfamilyInterproscan
IPR005550FamilyKinetochore protein Ndc80Interproscan
IPR033238FamilyB-cell lymphoma/leukemia 10/E10Interproscan
IPR001315DomainCARD domainInterproscan
IPR011029Homologous_superfamilyDeath-like domain superfamilyInterproscan
IPR037590FamilyGATOR2 complex protein WDR24Interproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036230Homologous_superfamily2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamilyInterproscan
IPR000891DomainPyruvate carboxyltransferaseInterproscan
IPR002034Conserved_siteAlpha-isopropylmalate/homocitrate synthase, conserved siteInterproscan
IPR005668Family2-isopropylmalate synthaseInterproscan
IPR013785Homologous_superfamilyAldolase-type TIM barrelInterproscan
IPR013709Domain2-isopropylmalate synthase LeuA, allosteric (dimerisation) domainInterproscan
IPR039371DomainLeuA, N-terminal catalytic TIM barrel domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42973BINDING OXIDOREDUCTASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G17690)-RELATEDInterproscan
PTHR15071MANNOSE-6-PHOSPHATE RECEPTOR FAMILY MEMBERInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR10643KINETOCHORE PROTEIN NDC80Interproscan
PTHR34920B-CELL LYMPHOMA/LEUKEMIA 10Interproscan
PTHR46200GATOR COMPLEX PROTEIN WDR24Interproscan
PTHR46911-Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0050660Molecular Functionflavin adenine dinucleotide bindingInterproscan
GO:0071949Molecular FunctionFAD bindingInterproscan
GO:0005537Molecular FunctionD-mannose bindingInterproscan
GO:0007041Biological Processlysosomal transportInterproscan
GO:0038023Molecular Functionsignaling receptor activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840Cellular ComponentribosomeInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0031262Cellular ComponentNdc80 complexInterproscan
GO:0051315Biological Processattachment of mitotic spindle microtubules to kinetochoreInterproscan
GO:0002250Biological Processadaptive immune responseInterproscan
GO:0003713Molecular Functiontranscription coactivator activityInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006915Biological Processapoptotic processInterproscan
GO:0007249Biological Processcanonical NF-kappaB signal transductionInterproscan
GO:0019209Molecular Functionkinase activator activityInterproscan
GO:0032449Cellular ComponentCBM complexInterproscan
GO:0043422Molecular Functionprotein kinase B bindingInterproscan
GO:0051059Molecular FunctionNF-kappaB bindingInterproscan
GO:0051092Biological Processpositive regulation of NF-kappaB transcription factor activityInterproscan
GO:2001238Biological Processpositive regulation of extrinsic apoptotic signaling pathwayInterproscan
GO:0042981Biological Processregulation of apoptotic processInterproscan
GO:0005774Cellular Componentvacuolar membraneInterproscan
GO:0016239Biological Processpositive regulation of macroautophagyInterproscan
GO:0032008Biological Processpositive regulation of TOR signalingInterproscan
GO:0034198Biological Processcellular response to amino acid starvationInterproscan
GO:0061700Cellular ComponentGATOR2 complexInterproscan
GO:1904263Biological Processpositive regulation of TORC1 signalingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0019752Biological Processcarboxylic acid metabolic processInterproscan
GO:0046912Molecular Functionacyltransferase activity, acyl groups converted into alkyl on transferInterproscan
GO:0003852Molecular Function2-isopropylmalate synthase activityInterproscan
GO:0009098Biological ProcessL-leucine biosynthetic processInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01649leuA, IMS; 2-isopropylmalate synthaseEC:2.3.3.13
Tuberculosisko05152deepkoala
Valine, leucine and isoleucine biosynthesisko00290deepkoala

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