Detailed information of g1357.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: KXJ27256.1, ATP-dependent DNA helicase PIF1 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P430905-aminolevulinate synthase, erythroid-specific, mitochondrial OS=Opsanus tau OX=8068 GN=alas2 PE=2 SV=1
Q3ZC315-aminolevulinate synthase, erythroid-specific, mitochondrial OS=Bos taurus OX=9913 GN=ALAS2 PE=2 SV=1
Q9XT755-aminolevulinate synthase, erythroid-specific, mitochondrial OS=Delphinapterus leucas OX=9749 GN=ALAS2 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan
PF12455DynactinDynein associated protein FamilyInterproscan
PF00575S1S1 RNA binding domainDomainInterproscan
PF20833RNase_E_G_ThioRNase E/G, Thioredoxin-like domainDomainInterproscan
PF10150RNase_E_GRibonuclease E/G familyFamilyInterproscan
PF00155Aminotran_1_2Aminotransferase class I and IIDomainInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF02798GST_NGlutathione S-transferase, N-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR037626FamilyNucleoporin Nup37Interproscan
IPR051227FamilyChondroitin sulfate glycosyltransferaseInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR022157DomainDynein associated proteinInterproscan
IPR003029DomainS1 domainInterproscan
IPR048583DomainRNase E/G, thioredoxin-like domainInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR004659FamilyRibonuclease E/GInterproscan
IPR019307FamilyRNA-binding protein AU-1/Ribonuclease E/GInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR004839DomainAminotransferase, class I/classIIInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR015424Homologous_superfamilyPyridoxal phosphate-dependent transferaseInterproscan
IPR015422Homologous_superfamilyPyridoxal phosphate-dependent transferase, small domainInterproscan
IPR015421Homologous_superfamilyPyridoxal phosphate-dependent transferase, major domainInterproscan
IPR001917Binding_siteAminotransferase, class-II, pyridoxal-phosphate binding siteInterproscan
IPR050087Family8-amino-7-oxononanoate synthase class-IIInterproscan
IPR036249Homologous_superfamilyThioredoxin-like superfamilyInterproscan
IPR004045DomainGlutathione S-transferase, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22806NUCLEOPORIN NUP37 P37 -RELATEDInterproscan
PTHR12369CHONDROITIN SYNTHASEInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR47501TRANSPOSASE-RELATEDInterproscan
PTHR33776ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR18916DYNACTIN 1-RELATED MICROTUBULE-BINDINGInterproscan
PTHR30001RIBONUCLEASEInterproscan
PTHR13693CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0031080Cellular Componentnuclear pore outer ringInterproscan
GO:0008376Molecular Functionacetylgalactosaminyltransferase activityInterproscan
GO:0030206Biological Processchondroitin sulfate biosynthetic processInterproscan
GO:0047238Molecular Functionglucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activityInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0031122Biological Processcytoplasmic microtubule organizationInterproscan
GO:0035371Cellular Componentmicrotubule plus-endInterproscan
GO:0051010Molecular Functionmicrotubule plus-end bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004540Molecular FunctionRNA nuclease activityInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0006364Biological ProcessrRNA processingInterproscan
GO:0009058Biological Processbiosynthetic processInterproscan
GO:0030170Molecular Functionpyridoxal phosphate bindingInterproscan
GO:0016740Molecular Functiontransferase activityInterproscan
GO:0003870Molecular Function5-aminolevulinate synthase activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0006783Biological Processheme biosynthetic processInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K08301rng, cafA; ribonuclease GEC:3.1.26.-
Ribosome biogenesisko03009deepkoala

TOP