Detailed information of g136.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_038564906.1, 15-hydroxyprostaglandin dehydrogenase [NAD(+)]-like [Micropterus salmoides]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P7068415-hydroxyprostaglandin dehydrogenase [NAD(+)] OS=Cavia porcellus OX=10141 GN=HPGD PE=2 SV=1
Q8VCC115-hydroxyprostaglandin dehydrogenase [NAD(+)] OS=Mus musculus OX=10090 GN=Hpgd PE=1 SV=1
P1542815-hydroxyprostaglandin dehydrogenase [NAD(+)] OS=Homo sapiens OX=9606 GN=HPGD PE=1 SV=1
Gene familySubfamily
Transcription Factors FamilyMYB

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04666Glyco_transf_54N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved regionFamilyInterproscan
PF18360hnRNP_Q_AcDHeterogeneous nuclear ribonucleoprotein Q acidic domainDomainInterproscan
PF00076RRM_1RNA recognition motifDomainInterproscan
PF00106adh_shortshort chain dehydrogenaseDomainInterproscan
PF13855LRR_8Leucine rich repeatRepeatInterproscan
PF18086PPIP5K2_NDiphosphoinositol pentakisphosphate kinase 2 N-terminal domainDomainInterproscan
PF00328His_Phos_2Histidine phosphatase superfamily (branch 2)FamilyInterproscan
PF08443RimKRimK-like ATP-grasp domainDomainInterproscan
PF00043GST_CGlutathione S-transferase, C-terminal domainDomainInterproscan
PF00249Myb_DNA-bindingMyb-like DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006759FamilyGlycosyl transferase family 54Interproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR041337DomainHeterogeneous nuclear ribonucleoprotein Q acidic domainInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR006535FamilyHnRNP R/Q splicing factorInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR002347FamilyShort-chain dehydrogenase/reductase SDRInterproscan
IPR036291Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR020904Conserved_siteShort-chain dehydrogenase/reductase, conserved siteInterproscan
IPR003591RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR050216FamilyLeucine-rich repeat domain-containing proteinInterproscan
IPR040557DomainVIP1, N-terminalInterproscan
IPR029033Homologous_superfamilyHistidine phosphatase superfamilyInterproscan
IPR000560FamilyHistidine phosphatase superfamily, clade-2Interproscan
IPR037446FamilyHistidine acid phosphatase, VIP1 familyInterproscan
IPR013651DomainATP-grasp fold, RimK-typeInterproscan
IPR004046DomainGlutathione S-transferase, C-terminalInterproscan
IPR001005DomainSANT/Myb domainInterproscan
IPR017930DomainMyb domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR052035FamilyZinc finger BED domain-containingInterproscan
IPR036282Homologous_superfamilyGlutathione S-transferase, C-terminal domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12062N-ACETYLGLUCOSAMINYLTRANSFERASE VIInterproscan
PTHR21245HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEINInterproscan
PTHR23159CENTROSOMAL PROTEIN 2Interproscan
PTHR48051-Interproscan
PTHR12750DIPHOSPHOINOSITOL PENTAKISPHOSPHATE KINASEInterproscan
PTHR46481ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006487Biological Processprotein N-linked glycosylationInterproscan
GO:0008375Molecular Functionacetylglucosaminyltransferase activityInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:1990904Cellular Componentribonucleoprotein complexInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0000828Molecular Functioninositol hexakisphosphate kinase activityInterproscan
GO:0000829Molecular Functiondiphosphoinositol pentakisphosphate kinase activityInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006020Biological Processinositol metabolic processInterproscan
GO:0032958Biological Processinositol phosphate biosynthetic processInterproscan
GO:0033857Molecular Function5-diphosphoinositol pentakisphosphate 1-kinase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K09609ADAMTS20; a disintegrin and metalloproteinase with thrombospondin motifs 20EC:3.4.24.-
Phosphatidylinositol signaling systemko04070deepkoala
Peptidases and inhibitorsko01002deepkoala

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