Detailed information of g1366.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: EDO44435.1, predicted protein [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9BZE0Zinc finger protein GLIS2 OS=Homo sapiens OX=9606 GN=GLIS2 PE=1 SV=2
Q8VDL9Zinc finger protein GLIS2 OS=Mus musculus OX=10090 GN=Glis2 PE=1 SV=1
Q98T94Zinc finger protein GLIS2 OS=Xenopus laevis OX=8355 GN=glis2 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00096zf-C2H2Zinc finger, C2H2 typeDomainInterproscan
PF14529Exo_endo_phos_2Endonuclease-reverse transcriptase DomainInterproscan
PF16546SGTA_dimerHomodimerisation domain of SGTADomainInterproscan
PF00515TPR_1Tetratricopeptide repeatRepeatInterproscan
PF13414TPR_11TPR repeatRepeatInterproscan
PF06417DUF1077Protein of unknown function (DUF1077)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR043359FamilyC2H2-type zinc-finger protein GLI-likeInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR047150FamilySGTInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR032374DomainSGTA, homodimerisation domainInterproscan
IPR009445FamilyTMEM85/ER membrane protein complex subunit 4Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45718TRANSCRIPTIONAL ACTIVATOR CUBITUS INTERRUPTUSInterproscan
PTHR23227BUCENTAUR RELATEDInterproscan
PTHR45831LD24721PInterproscan
PTHR19315ER MEMBRANE PROTEIN COMPLEX SUBUNIT 4Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000977Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0006620Biological Processpost-translational protein targeting to endoplasmic reticulum membraneInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0060090Molecular Functionmolecular adaptor activityInterproscan
GO:0072380Cellular ComponentTRC complexInterproscan
GO:0034975Biological Processprotein folding in endoplasmic reticulumInterproscan
GO:0072546Cellular ComponentEMC complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K16365SGTA; small glutamine-rich tetratricopeptide repeat-containing protein alpha-Membrane traffickingko04131deepkoala
Exosomeko04147deepkoala

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