Detailed information of g137.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_022781360.1, small G protein signaling modulator 3-like isoform X3 [Stylophora pistillata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q8VCZ6Small G protein signaling modulator 3 OS=Mus musculus OX=10090 GN=Sgsm3 PE=1 SV=1
Q7T2D0Small G protein signaling modulator 3 OS=Danio rerio OX=7955 GN=sgsm3 PE=2 SV=1
Q6P6R7Small G protein signaling modulator 3 OS=Rattus norvegicus OX=10116 GN=Sgsm3 PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyUBD|Other|SH3
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00579tRNA-synt_1btRNA synthetases class I (W and Y)FamilyInterproscan
PF13417GST_N_3Glutathione S-transferase, N-terminal domainDomainInterproscan
PF00043GST_CGlutathione S-transferase, C-terminal domainDomainInterproscan
PF04666Glyco_transf_54N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved regionFamilyInterproscan
PF07974EGF_2EGF-like domainDomainInterproscan
PF00566RabGAP-TBCRab-GTPase-TBC domainFamilyInterproscan
PF02759RUNRUN domainFamilyInterproscan
PF00018SH3_1SH3 domainDomainInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014729Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan
IPR050203FamilyTryptophan--tRNA ligaseInterproscan
IPR002305FamilyAminoacyl-tRNA synthetase, class IcInterproscan
IPR002306FamilyTryptophan-tRNA ligaseInterproscan
IPR001412Conserved_siteAminoacyl-tRNA synthetase, class I, conserved siteInterproscan
IPR004045DomainGlutathione S-transferase, N-terminalInterproscan
IPR010987DomainGlutathione S-transferase, C-terminal-likeInterproscan
IPR050983FamilyGlutathione S-transferase Omega/HSP26Interproscan
IPR036282Homologous_superfamilyGlutathione S-transferase, C-terminal domain superfamilyInterproscan
IPR036249Homologous_superfamilyThioredoxin-like superfamilyInterproscan
IPR004046DomainGlutathione S-transferase, C-terminalInterproscan
IPR040079FamilyGlutathione transferase familyInterproscan
IPR006759FamilyGlycosyl transferase family 54Interproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR042635FamilyMEGF10/SREC1/2-likeInterproscan
IPR002049DomainLaminin-type EGF domainInterproscan
IPR013111DomainEGF-like domain, extracellularInterproscan
IPR000195DomainRab-GAP-TBC domainInterproscan
IPR036028Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR050302FamilyRab GTPase-activating TBC domain-containing proteinInterproscan
IPR037213Homologous_superfamilyRUN domain superfamilyInterproscan
IPR004012DomainRUN domainInterproscan
IPR035969Homologous_superfamilyRab-GAP-TBC domain superfamilyInterproscan
IPR001452DomainSH3 domainInterproscan
IPR035833DomainSGSM3, SH3 domainInterproscan
IPR050630FamilyWD repeat Echinoderm Microtubule-associated Protein-likeInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR011047Homologous_superfamilyQuinoprotein alcohol dehydrogenase-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43766TRYPTOPHAN--TRNA LIGASE, MITOCHONDRIALInterproscan
PTHR43968-Interproscan
PTHR12062N-ACETYLGLUCOSAMINYLTRANSFERASE VIInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR24043SCAVENGER RECEPTOR CLASS FInterproscan
PTHR47219RAB GTPASE-ACTIVATING PROTEIN 1-LIKEInterproscan
PTHR13720WD-40 REPEAT PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004830Molecular Functiontryptophan-tRNA ligase activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0005759Cellular Componentmitochondrial matrixInterproscan
GO:0006436Biological Processtryptophanyl-tRNA aminoacylationInterproscan
GO:0070183Biological Processmitochondrial tryptophanyl-tRNA aminoacylationInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006487Biological Processprotein N-linked glycosylationInterproscan
GO:0008375Molecular Functionacetylglucosaminyltransferase activityInterproscan
GO:0005044Molecular Functionscavenger receptor activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K00799GST, gst; glutathione S-transferaseEC:2.5.1.18
Membrane traffickingko04131deepkoala
Transportersko02000deepkoala

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