Gene detail

Detailed information of g1372.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: KAJ7393640.1, Ropporin-1-like protein [Desmophyllum pertusum]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
Q4V7T8	Ropporin-1-like protein OS=Xenopus laevis OX=8355 GN=ropn1l PE=2 SV=1
Q66IC9	Ropporin-1-like protein OS=Danio rerio OX=7955 GN=ropn1l PE=2 SV=1
Q9EQ00	Ropporin-1-like protein OS=Mus musculus OX=10090 GN=Ropn1l PE=1 SV=2

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity RING\|PHD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01467	CTP_transf_like	Cytidylyltransferase-like	Domain	Interproscan
PF13639	zf-RING_2	Ring finger domain	Domain	Interproscan
PF00201	UDPGT	UDP-glucoronosyl and UDP-glucosyl transferase	Family	Interproscan
PF04592	SelP_N	Selenoprotein P, N terminal region	Family	Interproscan
PF01869	BcrAD_BadFG	BadF/BadG/BcrA/BcrD ATPase family	Family	Interproscan
PF00435	Spectrin	Spectrin repeat	Domain	Interproscan
PF00092	VWA	von Willebrand factor type A domain	Domain	Interproscan
PF00264	Tyrosinase	Common central domain of tyrosinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR014729	Homologous_superfamily	Rossmann-like alpha/beta/alpha sandwich fold	Interproscan
IPR041723	Domain	CTP:phosphocholine cytidylyltransferase domain	Interproscan
IPR044608	Family	Ethanolamine-phosphate cytidylyltransferase	Interproscan
IPR004821	Domain	Cytidyltransferase-like domain	Interproscan
IPR047844	Domain	Ropporin, dimerization/docking domain	Interproscan
IPR001841	Domain	Zinc finger, RING-type	Interproscan
IPR011016	Domain	Zinc finger, RING-CH-type	Interproscan
IPR039804	Domain	Listerin, zinc finger, RING-type	Interproscan
IPR039795	Family	E3 ubiquitin-protein ligase listerin	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR050271	Family	UDP-glycosyltransferase	Interproscan
IPR002213	Family	UDP-glucuronosyl/UDP-glucosyltransferase	Interproscan
IPR037941	Family	Selenoprotein P	Interproscan
IPR007671	Domain	Selenoprotein P, N-terminal	Interproscan
IPR043129	Homologous_superfamily	ATPase, nucleotide binding domain	Interproscan
IPR002731	Domain	ATPase, BadF/BadG/BcrA/BcrD type	Interproscan
IPR039758	Family	N-acetyl-D-glucosamine kinase NAGK-like	Interproscan
IPR002017	Repeat	Spectrin repeat	Interproscan
IPR018159	Repeat	Spectrin/alpha-actinin	Interproscan
IPR036465	Homologous_superfamily	von Willebrand factor A-like domain superfamily	Interproscan
IPR002035	Domain	von Willebrand factor, type A	Interproscan
IPR002227	Domain	Tyrosinase copper-binding domain	Interproscan
IPR050316	Family	Tyrosinase and Hemocyanin	Interproscan
IPR008922	Homologous_superfamily	Di-copper centre-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45780	ETHANOLAMINE-PHOSPHATE CYTIDYLYLTRANSFERASE	Interproscan
PTHR14952	ROPPORIN-1-LIKE PROTEIN	Interproscan
PTHR12389	ZINC FINGER PROTEIN 294	Interproscan
PTHR48043	EG:EG0003.4 PROTEIN-RELATED	Interproscan
PTHR10105	SELENOPROTEIN P	Interproscan
PTHR12862	BADF TYPE ATPASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR11915	SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN	Interproscan
PTHR11474	TYROSINASE FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004306	Molecular Function	ethanolamine-phosphate cytidylyltransferase activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006646	Biological Process	phosphatidylethanolamine biosynthetic process	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0009058	Biological Process	biosynthetic process	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0043023	Molecular Function	ribosomal large subunit binding	Interproscan
GO:0061630	Molecular Function	ubiquitin protein ligase activity	Interproscan
GO:0072344	Biological Process	rescue of stalled ribosome	Interproscan
GO:1990112	Cellular Component	RQC complex	Interproscan
GO:1990116	Biological Process	ribosome-associated ubiquitin-dependent protein catabolic process	Interproscan
GO:0008194	Molecular Function	UDP-glycosyltransferase activity	Interproscan
GO:0001887	Biological Process	selenium compound metabolic process	Interproscan
GO:0005576	Cellular Component	extracellular region	Interproscan
GO:0008430	Molecular Function	selenium binding	Interproscan
GO:0045127	Molecular Function	N-acetylglucosamine kinase activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K00967	PCYT2; ethanolamine-phosphate cytidylyltransferase	EC:2.7.7.14	Cilium and associated proteins	ko03037	deepkoala
			Amino sugar and nucleotide sugar metabolism	ko00520	deepkoala
			Phosphonate and phosphinate metabolism	ko00440	deepkoala