Detailed information of g1377.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: CAH3137263.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
A4IHR1Intraflagellar transport protein 70A OS=Xenopus tropicalis OX=8364 GN=ift70a PE=2 SV=1
Q6INU8Intraflagellar transport protein 70A OS=Xenopus laevis OX=8355 GN=ift70a PE=2 SV=1
A7YE96Intraflagellar transport protein 70A OS=Danio rerio OX=7955 GN=ift70a PE=2 SV=2
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00028CadherinCadherin domainDomainInterproscan
PF14959GSAP-16gamma-Secretase-activating protein C-termFamilyInterproscan
PF00704Glyco_hydro_18Glycosyl hydrolases family 18DomainInterproscan
PF09384UTP15_CUTP15 C terminalFamilyInterproscan
PF07707BACKBTB And C-terminal KelchDomainInterproscan
PF01344Kelch_1Kelch motifRepeatInterproscan
PF00378ECH_1Enoyl-CoA hydratase/isomeraseDomainInterproscan
PF14529Exo_endo_phos_2Endonuclease-reverse transcriptase DomainInterproscan
PF18701DUF5641Family of unknown function (DUF5641)DomainInterproscan
PF07719TPR_2Tetratricopeptide repeatRepeatInterproscan
PF00822PMP22_ClaudinPMP-22/EMP/MP20/Claudin familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR020894Conserved_siteCadherin conserved siteInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR039808FamilyCadherinInterproscan
IPR026172FamilyGamma-secretase-activating protein familyInterproscan
IPR028010DomainGamma-secretase-activating protein, C-terminal domainInterproscan
IPR001579Active_siteGlycosyl hydrolases family 18 (GH18) active siteInterproscan
IPR017853Homologous_superfamilyGlycoside hydrolase superfamilyInterproscan
IPR001223DomainGlycoside hydrolase family 18, catalytic domainInterproscan
IPR050542FamilyGlycosyl Hydrolase 18 Family ChitinasesInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR018983DomainU3 small nucleolar RNA-associated protein 15, C-terminalInterproscan
IPR011333Homologous_superfamilySKP1/BTB/POZ domain superfamilyInterproscan
IPR015915Homologous_superfamilyKelch-type beta propellerInterproscan
IPR017096FamilyBTB-kelch proteinInterproscan
IPR011705DomainBTB/Kelch-associatedInterproscan
IPR006652RepeatKelch repeat type 1Interproscan
IPR029045Homologous_superfamilyClpP/crotonase-like domain superfamilyInterproscan
IPR045002FamilyDelta(3,5)-Delta(2,4)-dienoyl-CoA isomerase Ech1-likeInterproscan
IPR001753FamilyEnoyl-CoA hydratase/isomeraseInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR040676DomainDomain of unknown function DUF5641Interproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR039941FamilyTetratricopeptide repeat protein 30Interproscan
IPR013105RepeatTetratricopeptide repeat 2Interproscan
IPR050579FamilyPeripheral Myelin Protein 22/Epithelial Membrane ProteinInterproscan
IPR004031FamilyPMP-22/EMP/MP20/ClaudinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24027CADHERIN-23Interproscan
PTHR13630GAMMA-SECRETASE-ACTIVATING PROTEINInterproscan
PTHR45708ENDOCHITINASEInterproscan
PTHR19924UTP15 U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 15 FAMILY MEMBERInterproscan
PTHR24412KELCH PROTEINInterproscan
PTHR43149ENOYL-COA HYDRATASEInterproscan
PTHR33395TRANSCRIPTASE, PUTATIVE-RELATED-RELATEDInterproscan
PTHR22955RETROTRANSPOSONInterproscan
PTHR20931UNCHARACTERIZEDInterproscan
PTHR10671EPITHELIAL MEMBRANE PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0016342Cellular Componentcatenin complexInterproscan
GO:0045296Molecular Functioncadherin bindingInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan
GO:0098742Biological Processcell-cell adhesion via plasma-membrane adhesion moleculesInterproscan
GO:0005802Cellular Componenttrans-Golgi networkInterproscan
GO:1902004Biological Processpositive regulation of amyloid-beta formationInterproscan
GO:0004553Molecular Functionhydrolase activity, hydrolyzing O-glycosyl compoundsInterproscan
GO:0005975Biological Processcarbohydrate metabolic processInterproscan
GO:0004568Molecular Functionchitinase activityInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0006364Biological ProcessrRNA processingInterproscan
GO:0045943Biological Processpositive regulation of transcription by RNA polymerase IInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0016853Molecular Functionisomerase activityInterproscan
GO:0051750Molecular Functiondelta(3,5)-delta(2,4)-dienoyl-CoA isomerase activityInterproscan
GO:0007508Biological Processlarval heart developmentInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan
GO:0061343Biological Processcell adhesion involved in heart morphogenesisInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005879Cellular Componentaxonemal microtubuleInterproscan
GO:0030992Cellular Componentintraciliary transport particle BInterproscan
GO:0042073Biological Processintraciliary transportInterproscan
GO:0120170Molecular Functionintraciliary transport particle B bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10443KLHL2_3; kelch-like protein 2/3-Cilium and associated proteinsko03037deepkoala
Ubiquitin systemko04121deepkoala

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