Detailed information of g1391.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: EDO45888.1, predicted protein [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q96L42Voltage-gated delayed rectifier potassium channel KCNH8 OS=Homo sapiens OX=9606 GN=KCNH8 PE=1 SV=2
Q9QWS8Voltage-gated delayed rectifier potassium channel KCNH8 OS=Rattus norvegicus OX=10116 GN=Kcnh8 PE=2 SV=2
P59111Voltage-gated delayed rectifier potassium channel KCNH8 OS=Mus musculus OX=10090 GN=Kcnh8 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00176SNF2-rel_domSNF2-related domainDomainInterproscan
PF00076RRM_1RNA recognition motifDomainInterproscan
PF13426PAS_9PAS domainDomainInterproscan
PF00027cNMP_bindingCyclic nucleotide-binding domainDomainInterproscan
PF00520Ion_transIon transport proteinFamilyInterproscan
PF00858ASCAmiloride-sensitive sodium channelFamilyInterproscan
PF04065Not3Not1 N-terminal domain, CCR4-Not complex component FamilyInterproscan
PF02140Gal_LectinGalactose binding lectin domainDomainInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF19745FUT8_N_catAlpha-(1,6)-fucosyltransferase N- and catalytic domainsDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050520FamilyINO80/SWR1 chromatin remodeling helicaseInterproscan
IPR000330DomainSNF2, N-terminalInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR038718Homologous_superfamilySNF2-like, N-terminal domain superfamilyInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR006548FamilySplicing factor ELAV/HuInterproscan
IPR002343FamilyParaneoplastic encephalomyelitis antigenInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR001610RepeatPAC motifInterproscan
IPR000014DomainPAS domainInterproscan
IPR000595DomainCyclic nucleotide-binding domainInterproscan
IPR003938FamilyPotassium channel, voltage-dependent, EAG/ELK/ERGInterproscan
IPR050818FamilyVoltage-gated potassium channel family HInterproscan
IPR014710Homologous_superfamilyRmlC-like jelly roll foldInterproscan
IPR003967FamilyPotassium channel, voltage-dependent, ERGInterproscan
IPR000700DomainPAS-associated, C-terminalInterproscan
IPR018490Homologous_superfamilyCyclic nucleotide-binding domain superfamilyInterproscan
IPR035965Homologous_superfamilyPAS domain superfamilyInterproscan
IPR005821DomainIon transport domainInterproscan
IPR001873FamilyEpithelial sodium channelInterproscan
IPR040168FamilyNot2/Not3/Not5Interproscan
IPR007207DomainCCR4-Not complex component, Not N-terminal domainInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR000922DomainD-galactoside/L-rhamnose binding SUEL lectin domainInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR043159Homologous_superfamilyD-galactoside/L-rhamnose binding SUEL lectin domain superfamilyInterproscan
IPR052065FamilyComplement and asymmetry regulatorInterproscan
IPR027350DomainGlycosyltransferase family 23 (GT23) domainInterproscan
IPR045573DomainAlpha-(1,6)-fucosyltransferase, N- and catalytic domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45685HELICASE SRCAP-RELATEDInterproscan
PTHR10352EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT GInterproscan
PTHR10217VOLTAGE AND LIGAND GATED POTASSIUM CHANNELInterproscan
PTHR11690AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATEDInterproscan
PTHR23326CCR4 NOT-RELATEDInterproscan
PTHR22906PROPERDINInterproscan
PTHR13132ALPHA- 1,6 -FUCOSYLTRANSFERASEInterproscan
PTHR33244INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000812Cellular ComponentSwr1 complexInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0042393Molecular Functionhistone bindingInterproscan
GO:0043044Biological Processchromatin remodelingInterproscan
GO:0043486Biological Processobsolete histone exchangeInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0140658Molecular FunctionATP-dependent chromatin remodeler activityInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:1990904Cellular Componentribonucleoprotein complexInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005249Molecular Functionvoltage-gated potassium channel activityInterproscan
GO:0006813Biological Processpotassium ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0042391Biological Processregulation of membrane potentialInterproscan
GO:0071805Biological Processpotassium ion transmembrane transportInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0005272Molecular Functionsodium channel activityInterproscan
GO:0006814Biological Processsodium ion transportInterproscan
GO:0015280Molecular Functionligand-gated sodium channel activityInterproscan
GO:0035725Biological Processsodium ion transmembrane transportInterproscan
GO:0000289Biological Processnuclear-transcribed mRNA poly(A) tail shorteningInterproscan
GO:0000932Cellular ComponentP-bodyInterproscan
GO:0030015Cellular ComponentCCR4-NOT core complexInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0030246Molecular Functioncarbohydrate bindingInterproscan
GO:0006487Biological Processprotein N-linked glycosylationInterproscan
GO:0036071Biological ProcessN-glycan fucosylationInterproscan
GO:0046921Molecular Functionalpha-(1->6)-fucosyltransferase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03440ASICN; acid-sensing ion channel, other-Spliceosomeko03041deepkoala
Ion channelsko04040deepkoala

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