Detailed information of g1392.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_020627647.1, la-related protein 7-like [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q4R627La-related protein 7 OS=Macaca fascicularis OX=9541 GN=LARP7 PE=2 SV=1
Q4G0J3La-related protein 7 OS=Homo sapiens OX=9606 GN=LARP7 PE=1 SV=1
Q5XI01La-related protein 7 OS=Rattus norvegicus OX=10116 GN=Larp7 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01805SurpSurp moduleFamilyInterproscan
PF09750DRY_EERYAlternative splicing regulator DomainInterproscan
PF05699Dimer_Tnp_hAThAT family C-terminal dimerisation regionDomainInterproscan
PF05383LaLa domainDomainInterproscan
PF00083Sugar_trSugar (and other) transporterFamilyInterproscan
PF02171PiwiPiwi domainFamilyInterproscan
PF02170PAZPAZ domainDomainInterproscan
PF03456uDENNuDENN domainDomainInterproscan
PF02141DENNDENN (AEX-3) domainFamilyInterproscan
PF20700MutatorMutator-like transposaseDomainInterproscan
PF13593SBF_likeSBF-like CPA transporter family (DUF4137)DomainInterproscan
PF02210Laminin_G_2Laminin G domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000061DomainSWAP/SurpInterproscan
IPR019147DomainSuppressor of white apricot, N-terminal domainInterproscan
IPR035967Homologous_superfamilySWAP/Surp superfamilyInterproscan
IPR040397FamilySuppressor of white apricotInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR008906DomainHAT, C-terminal dimerisation domainInterproscan
IPR052035FamilyZinc finger BED domain-containingInterproscan
IPR006630DomainLa-type HTH domainInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR045180FamilyLa domain containing proteinInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR002344FamilyLupus La proteinInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR036259Homologous_superfamilyMFS transporter superfamilyInterproscan
IPR005828FamilyMajor facilitator, sugar transporter-likeInterproscan
IPR020846DomainMajor facilitator superfamily domainInterproscan
IPR005829Conserved_siteSugar transporter, conserved siteInterproscan
IPR046370Homologous_superfamilyNeurogenic mastermind-like, N-terminal domain superfamilyInterproscan
IPR036085Homologous_superfamilyPAZ domain superfamilyInterproscan
IPR003165DomainPiwi domainInterproscan
IPR003100DomainPAZ domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR037516DomainTripartite DENN domainInterproscan
IPR005113DomainuDENN domainInterproscan
IPR043153Homologous_superfamilyDENN domain, C-terminal lobeInterproscan
IPR001194DomaincDENN domainInterproscan
IPR039980FamilyMAP kinase-activating death domain proteinInterproscan
IPR049012DomainMutator-like transposase domainInterproscan
IPR016833FamilyPutative sodium bile acid cotransporterInterproscan
IPR038770Homologous_superfamilySodium/solute symporter superfamilyInterproscan
IPR001791DomainLaminin G domainInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR050372FamilyNeurexin-related cell adhesion and synaptic proteinInterproscan
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13161SPLICING FACTOR SUPPRESSOR OF WHITE APRICOTInterproscan
PTHR46481ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4Interproscan
PTHR22792LUPUS LA PROTEIN-RELATEDInterproscan
PTHR24064SOLUTE CARRIER FAMILY 22 MEMBERInterproscan
PTHR22891EUKARYOTIC TRANSLATION INITIATION FACTOR 2CInterproscan
PTHR13008MAP-KINASE ACTIVATING DEATH DOMAIN PROTEIN MADD /DENN/AEX-3 C.ELEGANSInterproscan
PTHR31751SI:CH211-108C17.2-RELATED-RELATEDInterproscan
PTHR18640SOLUTE CARRIER FAMILY 10 MEMBER 7Interproscan
PTHR15036PIKACHURIN-LIKE PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0000395Biological ProcessmRNA 5'-splice site recognitionInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:1990904Cellular Componentribonucleoprotein complexInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004521Molecular FunctionRNA endonuclease activityInterproscan
GO:0031047Biological Processregulatory ncRNA-mediated gene silencingInterproscan
GO:0034584Molecular FunctionpiRNA bindingInterproscan
GO:0043186Cellular ComponentP granuleInterproscan
GO:0005085Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0032483Biological Processregulation of Rab protein signal transductionInterproscan
GO:0042981Biological Processregulation of apoptotic processInterproscan
GO:0009941Cellular Componentchloroplast envelopeInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K08205SLC22A8, OAT3; MFS transporter, OCT family, solute carrier family 22 (organic anion transporter), member 8-Chromosome and associated proteinsko03036deepkoala
Transportersko02000deepkoala

TOP