Detailed information of g13963.t1 in Montipora capitata

Genomic Location: Sc0000498:787...17516
NR annotation: XP_044178503.1, DNA ligase 3-like isoform X1 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P49916DNA ligase 3 OS=Homo sapiens OX=9606 GN=LIG3 PE=1 SV=2
P97386DNA ligase 3 OS=Mus musculus OX=10090 GN=Lig3 PE=1 SV=2
O57250DNA ligase OS=Vaccinia virus (strain Ankara) OX=126794 GN=OPG180 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10283zf-CCHHPBZ domainDomainInterproscan
PF04679DNA_ligase_A_CATP dependent DNA ligase C terminal region FamilyInterproscan
PF01068DNA_ligase_A_MATP dependent DNA ligase domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036420Homologous_superfamilyBRCT domain superfamilyInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR012310DomainDNA ligase, ATP-dependent, centralInterproscan
IPR019406DomainAprataxin and PNK-like factor, PBZ domainInterproscan
IPR012309DomainDNA ligase, ATP-dependent, C-terminalInterproscan
IPR050191FamilyATP-dependent DNA ligaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45674DNA LIGASE 1/3 FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003910Molecular FunctionDNA ligase (ATP) activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006310Biological ProcessDNA recombinationInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006266Biological ProcessDNA ligationInterproscan
GO:0006273Biological Processlagging strand elongationInterproscan
GO:0006288Biological Processbase-excision repair, DNA ligationInterproscan
GO:0006302Biological Processdouble-strand break repairInterproscan
GO:0070421Cellular ComponentDNA ligase III-XRCC1 complexInterproscan

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