Detailed information of g1397.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_032223175.2, small conductance calcium-activated potassium channel protein 2 [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P09057Ornithine decarboxylase OS=Rattus norvegicus OX=10116 GN=Odc1 PE=1 SV=1
P00860Ornithine decarboxylase OS=Mus musculus OX=10090 GN=Odc1 PE=1 SV=2
P27119Ornithine decarboxylase OS=Mus pahari OX=10093 GN=Odc1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09414RNA_ligaseRNA ligaseFamilyInterproscan
PF14223Retrotran_gag_2gag-polypeptide of LTR copia-typeFamilyInterproscan
PF07885Ion_trans_2Ion channelFamilyInterproscan
PF02784Orn_Arg_deC_NPyridoxal-dependent decarboxylase, pyridoxal binding domainDomainInterproscan
PF00278Orn_DAP_Arg_deCPyridoxal-dependent decarboxylase, C-terminal sheet domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR021122DomainRNA ligase domain, REL/Rln2Interproscan
IPR041948Homologous_superfamilyRNA ligase 1/2, C-terminal domain superfamilyInterproscan
IPR015449FamilyPotassium channel, calcium-activated, SKInterproscan
IPR013099DomainPotassium channel domainInterproscan
IPR039904FamilyTPR and ankyrin repeat-containing protein 1Interproscan
IPR002433FamilyOrnithine decarboxylaseInterproscan
IPR009006Homologous_superfamilyAlanine racemase/group IV decarboxylase, C-terminalInterproscan
IPR022644DomainOrn/DAP/Arg decarboxylase 2, N-terminalInterproscan
IPR022653Binding_siteOrn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding siteInterproscan
IPR000183FamilyOrnithine/DAP/Arg decarboxylaseInterproscan
IPR022643DomainOrn/DAP/Arg decarboxylase 2, C-terminalInterproscan
IPR029066Homologous_superfamilyPLP-binding barrelInterproscan
IPR043151Homologous_superfamilyBromo adjacent homology (BAH) domain superfamilyInterproscan
IPR053032FamilyBromo adjacent homology domain-containing proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR34718PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR10153SMALL CONDUCTANCE CALCIUM-ACTIVATED POTASSIUM CHANNELInterproscan
PTHR21529MAMMARY TURMOR VIRUS RECEPTOR HOMOLOG 1, 2 MTVR1, 2Interproscan
PTHR11482ARGININE/DIAMINOPIMELATE/ORNITHINE DECARBOXYLASEInterproscan
PTHR46576BROMO ADJACENT HOMOLOGY DOMAIN-CONTAINING 1 PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005516Molecular Functioncalmodulin bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0006813Biological Processpotassium ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016286Molecular Functionsmall conductance calcium-activated potassium channel activityInterproscan
GO:0071805Biological Processpotassium ion transmembrane transportInterproscan
GO:0004586Molecular Functionornithine decarboxylase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006596Biological Processpolyamine biosynthetic processInterproscan
GO:0033387Biological Processputrescine biosynthetic process from ornithineInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K23561CLK1_4; dual specificity protein kinase CLK1/4EC:2.7.12.1
Efferocytosisko04148deepkoala
Spliceosomeko03041deepkoala

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